Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 AC011453.2-201ENST00000603737 729 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNA1P78396 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNA1P78396 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.6□□□□□ -1.51
CCNA1P78396 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCNA1P78396 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNA1P78396 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
CCNA1P78396 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNA1P78396 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCNA1P78396 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.6□□□□□ -1.51
CCNA1P78396 RBPJP2-201ENST00000618187 1444 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AC068538.1-201ENST00000376856 336 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 SEPT7P8-201ENST00000413308 775 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 TBCAP2-201ENST00000416175 326 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AC009506.2-201ENST00000420635 840 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AL450023.3-201ENST00000440592 271 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNA1P78396 AC002553.2-201ENST00000453217 340 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.6□□□□□ -1.51
CCNA1P78396 AC130364.2-201ENST00000528639 604 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNA1P78396 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.6□□□□□ -1.51
CCNA1P78396 MIR4675-201ENST00000577898 77 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 MIR4277-201ENST00000578298 84 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 SS18L2P2-201ENST00000583960 235 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.6□□□□□ -1.51
CCNA1P78396 AC108359.1-201ENST00000616451 1211 ntBASIC5.6□□□□□ -1.51
CCNA1P78396 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCNA1P78396 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.6□□□□□ -1.51
CCNA1P78396 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCNA1P78396 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCNA1P78396 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.6□□□□□ -1.51
CCNA1P78396 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCNA1P78396 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNA1P78396 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 MAPK10-328ENST00000641553 4009 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AP000473.2-201ENST00000602659 1537 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNA1P78396 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCNA1P78396 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCNA1P78396 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CCNA1P78396 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNA1P78396 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNA1P78396 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNA1P78396 MIR133A2-201ENST00000347538 102 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 U3.30-201ENST00000391308 210 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.59□□□□□ -1.51
CCNA1P78396 AL049697.2-201ENST00000403708 294 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AL354766.1-201ENST00000423396 542 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNA1P78396 ARL2BPP10-201ENST00000446487 531 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AC009963.2-201ENST00000453431 138 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 OR11I1P-201ENST00000486033 954 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNA1P78396 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNA1P78396 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.59□□□□□ -1.51
CCNA1P78396 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNA1P78396 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNA1P78396 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.59□□□□□ -1.51
CCNA1P78396 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNA1P78396 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNA1P78396 ATP5J2P6-201ENST00000565203 266 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNA1P78396 RN7SL290P-201ENST00000578661 300 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.59□□□□□ -1.51
CCNA1P78396 AC022726.1-201ENST00000587475 207 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AC087468.1-201ENST00000604365 630 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNA1P78396 AC010424.2-201ENST00000607594 443 ntBASIC5.59□□□□□ -1.51
CCNA1P78396 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNA1P78396 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.59□□□□□ -1.51
CCNA1P78396 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCNA1P78396 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCNA1P78396 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNA1P78396 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.59□□□□□ -1.51
CCNA1P78396 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
CCNA1P78396 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CCNA1P78396 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CCNA1P78396 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCNA1P78396 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.59□□□□□ -1.52
CCNA1P78396 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.58□□□□□ -1.52
CCNA1P78396 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCNA1P78396 AL049693.1-201ENST00000402760 611 ntBASIC5.58□□□□□ -1.52
CCNA1P78396 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNA1P78396 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.58□□□□□ -1.52
CCNA1P78396 MED28P3-201ENST00000444288 531 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms