Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 MAPK10-303ENST00000641324 3959 ntBASIC4.24□□□□□ -1.73
UBA52P62987 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.24□□□□□ -1.73
UBA52P62987 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
UBA52P62987 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 MIR141-201ENST00000384975 95 ntBASIC4.24□□□□□ -1.73
UBA52P62987 MIR600-201ENST00000385007 98 ntBASIC4.24□□□□□ -1.73
UBA52P62987 SNORD96B-201ENST00000386148 79 ntBASIC4.24□□□□□ -1.73
UBA52P62987 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 VDAC2P1-201ENST00000399358 958 ntBASIC4.24□□□□□ -1.73
UBA52P62987 HDGFP1-201ENST00000405943 252 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AC016397.1-201ENST00000412463 242 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.24□□□□□ -1.73
UBA52P62987 AC004448.2-201ENST00000422360 586 ntBASIC4.24□□□□□ -1.73
UBA52P62987 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 AC009238.2-201ENST00000431026 355 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.24□□□□□ -1.73
UBA52P62987 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.24□□□□□ -1.73
UBA52P62987 AL589765.3-201ENST00000446084 462 ntBASIC4.24□□□□□ -1.73
UBA52P62987 TRY2P-201ENST00000448860 689 ntBASIC4.24□□□□□ -1.73
UBA52P62987 TPT1P13-201ENST00000449760 499 ntBASIC4.24□□□□□ -1.73
UBA52P62987 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.24□□□□□ -1.73
UBA52P62987 AC009220.1-201ENST00000451614 275 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AC104634.1-201ENST00000452720 462 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AC092647.2-201ENST00000452998 253 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 AC079168.1-201ENST00000458741 345 ntBASIC4.24□□□□□ -1.73
UBA52P62987 RN7SL189P-201ENST00000468631 289 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.24□□□□□ -1.73
UBA52P62987 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.24□□□□□ -1.73
UBA52P62987 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.24□□□□□ -1.73
UBA52P62987 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.24□□□□□ -1.73
UBA52P62987 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.24□□□□□ -1.73
UBA52P62987 AC005868.1-201ENST00000536421 331 ntBASIC4.24□□□□□ -1.73
UBA52P62987 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
UBA52P62987 AC140113.4-201ENST00000622087 222 ntBASIC4.24□□□□□ -1.73
UBA52P62987 MIR6810-201ENST00000622701 70 ntBASIC4.24□□□□□ -1.73
UBA52P62987 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 AC138627.1-204ENST00000641894 765 ntBASIC4.24□□□□□ -1.73
UBA52P62987 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
UBA52P62987 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 AL672167.1-205ENST00000641112 3080 ntBASIC4.24□□□□□ -1.73
UBA52P62987 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.24□□□□□ -1.73
UBA52P62987 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBA52P62987 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
UBA52P62987 AL359922.3-201ENST00000624779 1670 ntBASIC4.23□□□□□ -1.73
UBA52P62987 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
UBA52P62987 AC010132.2-201ENST00000295493 1043 ntBASIC4.23□□□□□ -1.73
UBA52P62987 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 RNU1-146P-201ENST00000364015 165 ntBASIC4.23□□□□□ -1.73
UBA52P62987 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.23□□□□□ -1.73
UBA52P62987 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.23□□□□□ -1.73
UBA52P62987 COX6B1P1-201ENST00000415962 213 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AC245028.1-201ENST00000423259 256 ntBASIC4.23□□□□□ -1.73
UBA52P62987 SETP10-201ENST00000424368 814 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.23□□□□□ -1.73
UBA52P62987 RPL21P133-201ENST00000443666 476 ntBASIC4.23□□□□□ -1.73
UBA52P62987 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.23□□□□□ -1.73
UBA52P62987 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.23□□□□□ -1.73
UBA52P62987 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.23□□□□□ -1.73
UBA52P62987 AC097484.1-201ENST00000471148 389 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AC090589.1-201ENST00000473109 362 ntBASIC4.23□□□□□ -1.73
UBA52P62987 RN7SL817P-201ENST00000480777 288 ntBASIC4.23□□□□□ -1.73
UBA52P62987 RN7SL423P-201ENST00000486202 304 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AC005412.2-201ENST00000492004 341 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.23□□□□□ -1.73
UBA52P62987 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.23□□□□□ -1.73
UBA52P62987 AC137768.1-201ENST00000549998 553 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.23□□□□□ -1.73
UBA52P62987 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.23□□□□□ -1.73
UBA52P62987 AC005252.1-201ENST00000604518 1063 ntBASIC4.23□□□□□ -1.73
UBA52P62987 AC091979.2-201ENST00000607514 214 ntBASIC4.23□□□□□ -1.73
UBA52P62987 SNX18P1Y-201ENST00000616231 511 ntBASIC4.23□□□□□ -1.73
UBA52P62987 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UBA52P62987 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.23□□□□□ -1.73
UBA52P62987 AC017104.4-201ENST00000636283 1592 ntBASIC4.23□□□□□ -1.73
UBA52P62987 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.22□□□□□ -1.73
UBA52P62987 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBA52P62987 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
UBA52P62987 AL353625.1-202ENST00000366273 571 ntBASIC4.22□□□□□ -1.73
UBA52P62987 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms