Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC067773.1-201ENST00000603284 1094 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 AL118522.2-201ENST00000616045 615 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC021106.3-201ENST00000623925 531 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 AC007683.2-201ENST00000624681 714 ntBASIC3.51□□□□□ -1.85
CKS1BP61024 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CKS1BP61024 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CKS1BP61024 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.51□□□□□ -1.85
CKS1BP61024 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 AL627171.1-201ENST00000618845 1308 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CKS1BP61024 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
CKS1BP61024 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 RNA5SP433-201ENST00000364491 114 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 OR13C3-201ENST00000374781 1108 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 MIR195-201ENST00000385194 87 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 SNORD96B-201ENST00000386148 79 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 AL035079.1-201ENST00000405210 287 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL390316.1-201ENST00000406279 553 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.5□□□□□ -1.85
CKS1BP61024 EEF1B2P8-201ENST00000414101 671 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.5□□□□□ -1.85
CKS1BP61024 AC004448.2-201ENST00000422360 586 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 BX119904.1-201ENST00000432026 348 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 RPL35AP21-201ENST00000437667 333 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 PPIAP17-201ENST00000438507 471 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 AC011753.3-201ENST00000443436 406 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 GYG1P1-201ENST00000460864 698 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 RN7SL814P-201ENST00000487715 300 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 RPL15P21-201ENST00000495592 567 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL136038.1-201ENST00000497246 351 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 B4GALNT2P1-201ENST00000508857 307 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 RNA5SP249-201ENST00000516127 99 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 RNA5SP392-201ENST00000516905 112 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 AP006289.1-201ENST00000538089 277 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 MTND6P33-201ENST00000571794 183 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.5□□□□□ -1.85
CKS1BP61024 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.5□□□□□ -1.85
CKS1BP61024 AC090953.1-201ENST00000604305 1092 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC011626.1-201ENST00000604710 562 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC010200.2-201ENST00000605098 235 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL139041.1-201ENST00000605480 610 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC018695.5-201ENST00000605872 315 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 AL713922.2-201ENST00000619384 716 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AL591926.1-201ENST00000620542 217 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 AC132068.1-201ENST00000623805 459 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CKS1BP61024 MIR193BHG-214ENST00000641765 509 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 EXOC5P1-201ENST00000510543 1969 ntBASIC3.5□□□□□ -1.85
CKS1BP61024 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.5□□□□□ -1.85
CKS1BP61024 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CKS1BP61024 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.5□□□□□ -1.85
CKS1BP61024 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CKS1BP61024 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.49□□□□□ -1.85
CKS1BP61024 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 OR7E25P-201ENST00000344844 931 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS1BP61024 RNA5SP319-201ENST00000362768 119 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CKS1BP61024 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CKS1BP61024 AL589994.1-201ENST00000404962 340 ntBASIC3.49□□□□□ -1.85
CKS1BP61024 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC3.49□□□□□ -1.85
CKS1BP61024 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms