Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 NPM1P4-201ENST00000414095 812 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 FAM96AP1-201ENST00000430879 482 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 RPS27P18-201ENST00000431701 247 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.5□□□□□ -1.53
HDAC4P56524 DNAJB5P1-201ENST00000454004 806 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 TPT1P1-201ENST00000458495 518 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 RN7SL515P-201ENST00000463999 297 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC078857.1-201ENST00000469870 667 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC016550.1-201ENST00000505348 785 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 AC027369.5-201ENST00000533838 755 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.5□□□□□ -1.53
HDAC4P56524 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.5□□□□□ -1.53
HDAC4P56524 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 MIR4472-2-201ENST00000582069 67 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC015911.5-201ENST00000587076 451 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 AP003117.1-201ENST00000602771 554 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 ABI1P1-201ENST00000603375 1120 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC008814.1-201ENST00000603797 406 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 IMMP1LP3-201ENST00000604197 224 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 SUMO2P15-201ENST00000604285 278 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC011626.1-201ENST00000604710 562 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 AC097460.3-201ENST00000623099 442 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 CASC19-264ENST00000641912 1184 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.5□□□□□ -1.53
HDAC4P56524 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HDAC4P56524 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HDAC4P56524 AL121950.1-201ENST00000624993 2077 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 VPS35P1-201ENST00000563400 1518 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HDAC4P56524 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HDAC4P56524 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC005294.1-201ENST00000355509 281 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 SNORA58B-201ENST00000364259 136 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HDAC4P56524 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HDAC4P56524 MIR105-1-201ENST00000385222 81 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC006065.1-201ENST00000422539 802 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HDAC4P56524 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 RPL23AP4-201ENST00000427757 463 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AC090018.1-201ENST00000434369 367 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 NPM1P33-201ENST00000438918 872 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.49□□□□□ -1.53
HDAC4P56524 MTND2P6-201ENST00000455337 1030 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AC108161.1-201ENST00000461060 402 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC092593.2-201ENST00000513866 913 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC113192.3-201ENST00000529152 742 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 OSBPL9P3-201ENST00000534523 595 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC126365.2-201ENST00000580630 379 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 MIR3936-201ENST00000584304 110 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.49□□□□□ -1.53
HDAC4P56524 AC090330.1-201ENST00000588646 764 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 BNIP3P27-201ENST00000599991 412 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AC069307.1-201ENST00000602820 447 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 MTCO3P22-201ENST00000603219 784 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HDAC4P56524 FRG1EP-201ENST00000634469 770 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 AC074101.1-201ENST00000637861 241 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.49□□□□□ -1.53
HDAC4P56524 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HDAC4P56524 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
HDAC4P56524 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.49□□□□□ -1.53
HDAC4P56524 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.48□□□□□ -1.53
HDAC4P56524 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AC023421.1-201ENST00000590535 1785 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AP000568.1-201ENST00000282964 442 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms