Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 VDAC2P1-201ENST00000399358 958 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC136624.1-201ENST00000400791 413 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 ATF1P1-201ENST00000406040 927 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC006960.1-201ENST00000419980 153 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 AL445928.1-201ENST00000435545 222 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC122718.1-201ENST00000439448 744 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC104164.1-201ENST00000460282 590 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 FAM133DP-201ENST00000464802 691 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC099521.1-201ENST00000482557 334 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC069528.1-202ENST00000482888 637 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC124945.1-201ENST00000485133 188 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 RPL23AP40-201ENST00000487630 390 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 SCARNA21.2-201ENST00000516600 166 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 CYCSP22-201ENST00000517555 339 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AP001804.1-201ENST00000526868 919 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC027544.3-201ENST00000535082 757 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 RPS3AP4-201ENST00000555161 764 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC018558.5-201ENST00000565840 952 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC092325.1-201ENST00000566449 554 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 ISCA1P3-201ENST00000577104 373 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 SNORA59B-202ENST00000578183 701 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 AL352984.2-201ENST00000611153 546 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC008498.1-201ENST00000613012 531 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AL359757.1-201ENST00000623176 255 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.27□□□□□ -1.41
EPHB3P54753 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 ZNF658B-201ENST00000602828 3408 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 AC110373.1-201ENST00000505994 3505 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 OR13C1P-202ENST00000641378 2919 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.27□□□□□ -1.41
EPHB3P54753 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
EPHB3P54753 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 AL662795.2-201ENST00000624252 3706 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
EPHB3P54753 DNM1P47-203ENST00000571780 12667 ntBASIC6.27□□□□□ -1.41
EPHB3P54753 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
EPHB3P54753 SHQ1P1-201ENST00000437111 1544 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC016583.1-201ENST00000624221 2431 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 RNA5SP242-201ENST00000364171 118 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 RN7SKP229-201ENST00000410465 302 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 RPL34P3-201ENST00000421454 338 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 PNRC2P1-201ENST00000423940 420 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.26□□□□□ -1.41
EPHB3P54753 MTND1P2-201ENST00000430604 821 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 MTCYBP34-201ENST00000439552 670 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 ELOCP10-201ENST00000440624 327 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 RPS7P3-201ENST00000443360 580 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 YWHAEP1-201ENST00000453697 763 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms