Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC119674.1-212ENST00000641155 993 ntBASIC5.72□□□□□ -1.49
COPAP53621 CASC19-264ENST00000641912 1184 ntBASIC5.72□□□□□ -1.49
COPAP53621 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.72□□□□□ -1.49
COPAP53621 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.72□□□□□ -1.49
COPAP53621 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 AL132640.2-201ENST00000559968 1698 ntBASIC5.72□□□□□ -1.49
COPAP53621 AC107027.3-201ENST00000565095 3473 ntBASIC5.72□□□□□ -1.49
COPAP53621 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.72□□□□□ -1.49
COPAP53621 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPAP53621 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COPAP53621 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 AL590763.1-201ENST00000398297 1545 ntBASIC5.71□□□□□ -1.5
COPAP53621 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 RNA5SP187-201ENST00000384400 119 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC009804.1-201ENST00000400949 179 ntBASIC5.71□□□□□ -1.5
COPAP53621 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 MIR1286-201ENST00000408112 78 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC079809.1-201ENST00000415468 276 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 HMGB3P5-201ENST00000428894 612 ntBASIC5.71□□□□□ -1.5
COPAP53621 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 AP000936.3-201ENST00000438127 255 ntBASIC5.71□□□□□ -1.5
COPAP53621 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 YWHAZP2-201ENST00000440317 728 ntBASIC5.71□□□□□ -1.5
COPAP53621 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 RPL5P25-201ENST00000441148 775 ntBASIC5.71□□□□□ -1.5
COPAP53621 AL035551.1-201ENST00000446931 348 ntBASIC5.71□□□□□ -1.5
COPAP53621 VDAC2P4-201ENST00000452925 711 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC008280.2-201ENST00000455473 307 ntBASIC5.71□□□□□ -1.5
COPAP53621 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 RPSAP51-201ENST00000497462 645 ntBASIC5.71□□□□□ -1.5
COPAP53621 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.71□□□□□ -1.5
COPAP53621 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.71□□□□□ -1.5
COPAP53621 NPM1P35-201ENST00000533043 868 ntBASIC5.71□□□□□ -1.5
COPAP53621 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.71□□□□□ -1.5
COPAP53621 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.71□□□□□ -1.5
COPAP53621 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.71□□□□□ -1.5
COPAP53621 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.71□□□□□ -1.5
COPAP53621 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 AL021707.7-201ENST00000607991 416 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC093673.2-201ENST00000609674 331 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC016769.4-201ENST00000616893 535 ntBASIC5.71□□□□□ -1.5
COPAP53621 MIR6133-201ENST00000617057 108 ntBASIC5.71□□□□□ -1.5
COPAP53621 AL356274.1-201ENST00000617064 410 ntBASIC5.71□□□□□ -1.5
COPAP53621 AC022079.2-201ENST00000619739 566 ntBASIC5.71□□□□□ -1.5
COPAP53621 AL356863.1-201ENST00000623378 1080 ntBASIC5.71□□□□□ -1.5
COPAP53621 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
COPAP53621 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.71□□□□□ -1.5
COPAP53621 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.71□□□□□ -1.5
COPAP53621 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPAP53621 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPAP53621 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.7□□□□□ -1.5
COPAP53621 GVINP1-202ENST00000531871 7271 ntBASIC5.7□□□□□ -1.5
COPAP53621 PABPC1P6-201ENST00000445594 1829 ntBASIC5.7□□□□□ -1.5
COPAP53621 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 RNA5SP319-201ENST00000362768 119 ntBASIC5.7□□□□□ -1.5
COPAP53621 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 SNORA70.6-201ENST00000383934 134 ntBASIC5.7□□□□□ -1.5
COPAP53621 AP000534.2-201ENST00000412729 568 ntBASIC5.7□□□□□ -1.5
COPAP53621 RPS6P23-201ENST00000413224 722 ntBASIC5.7□□□□□ -1.5
COPAP53621 RPL35AP24-201ENST00000413846 330 ntBASIC5.7□□□□□ -1.5
COPAP53621 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 MTCO3P4-201ENST00000419236 787 ntBASIC5.7□□□□□ -1.5
COPAP53621 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPAP53621 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.7□□□□□ -1.5
COPAP53621 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.7□□□□□ -1.5
COPAP53621 AC006335.2-201ENST00000437993 330 ntBASIC5.7□□□□□ -1.5
COPAP53621 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms