Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 AP001002.1-201ENST00000625148 1513 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CLCN3P51790 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 AL672167.2-201ENST00000377164 879 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 ADAM24P-201ENST00000398655 2101 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 HMGB3P7-201ENST00000400214 611 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 GTF2IP5-201ENST00000414608 731 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 RPL26P29-201ENST00000415623 438 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 BTF3P9-201ENST00000418784 283 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 PTP4A1P1-201ENST00000420539 515 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC007000.2-201ENST00000442564 487 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 AL627224.1-201ENST00000448334 444 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 GAPDHP14-201ENST00000450472 937 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 AC098583.1-201ENST00000480875 255 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 DUX4L52-201ENST00000549363 777 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.49□□□□□ -1.53
CLCN3P51790 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCN3P51790 MIR3667-201ENST00000581025 74 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 BMS1P7-201ENST00000602440 1052 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AC020910.3-201ENST00000603701 874 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 KATNBL1P5-201ENST00000605015 517 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AC242628.1-201ENST00000606810 391 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AC016542.1-201ENST00000608259 493 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AP001521.2-201ENST00000608772 546 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.49□□□□□ -1.53
CLCN3P51790 AC253576.2-201ENST00000618815 580 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.49□□□□□ -1.53
CLCN3P51790 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CLCN3P51790 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.49□□□□□ -1.53
CLCN3P51790 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLCN3P51790 AC063976.2-201ENST00000425667 3556 ntBASIC5.49□□□□□ -1.53
CLCN3P51790 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC110792.3-201ENST00000595906 1614 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLCN3P51790 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLCN3P51790 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 RNVU1-6-201ENST00000364688 164 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 RNA5SP105-201ENST00000391123 113 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 LRRC37BP1-201ENST00000398851 714 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 RANP4-201ENST00000413361 655 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 VTI1BP4-201ENST00000427516 527 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AL450023.3-201ENST00000440592 271 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCN3P51790 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC004980.3-201ENST00000447046 365 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCN3P51790 AC010733.1-201ENST00000451515 401 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AL691482.1-201ENST00000453255 87 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 RPS29P22-201ENST00000472363 168 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 OR11I1P-201ENST00000486033 954 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 RN7SL441P-201ENST00000492388 296 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 AC008897.1-201ENST00000494006 347 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 OR9N1P-202ENST00000494289 481 ntBASIC5.48□□□□□ -1.53
CLCN3P51790 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCN3P51790 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms