Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 BX005214.3-202ENST00000619809 325 ntBASIC8.3□□□□□ -1.08
SMARCA2P51531 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.3□□□□□ -1.08
SMARCA2P51531 MIR3653-201ENST00000625572 110 ntBASIC8.3□□□□□ -1.08
SMARCA2P51531 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC8.3□□□□□ -1.08
SMARCA2P51531 AC004817.4-201ENST00000602396 3625 ntBASIC8.3□□□□□ -1.08
SMARCA2P51531 AL033543.1-201ENST00000623440 13454 ntBASIC8.3□□□□□ -1.08
SMARCA2P51531 AL121950.1-201ENST00000624993 2077 ntBASIC8.3□□□□□ -1.08
SMARCA2P51531 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SMARCA2P51531 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA2P51531 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.29□□□□□ -1.08
SMARCA2P51531 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA2P51531 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC8.29□□□□□ -1.08
SMARCA2P51531 AC011447.7-201ENST00000624228 1590 ntBASIC8.29□□□□□ -1.08
SMARCA2P51531 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SMARCA2P51531 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SMARCA2P51531 RNU1-130P-201ENST00000363930 160 ntBASIC8.29□□□□□ -1.08
SMARCA2P51531 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC8.29□□□□□ -1.08
SMARCA2P51531 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
SMARCA2P51531 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.29□□□□□ -1.08
SMARCA2P51531 DPPA3P2-201ENST00000553589 478 ntBASIC8.29□□□□□ -1.08
SMARCA2P51531 MRPS21P9-201ENST00000571150 257 ntBASIC8.29□□□□□ -1.08
SMARCA2P51531 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.29□□□□□ -1.08
SMARCA2P51531 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA2P51531 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
SMARCA2P51531 OR51H2P-202ENST00000641424 3046 ntBASIC8.29□□□□□ -1.08
SMARCA2P51531 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA2P51531 VN2R3P-201ENST00000422626 1412 ntBASIC8.29□□□□□ -1.08
SMARCA2P51531 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SMARCA2P51531 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SMARCA2P51531 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.28□□□□□ -1.08
SMARCA2P51531 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 Y_RNA.333-201ENST00000365274 102 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 NPM1P36-201ENST00000415681 835 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 AC008280.1-201ENST00000418851 412 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC8.28□□□□□ -1.08
SMARCA2P51531 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC8.28□□□□□ -1.08
SMARCA2P51531 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.28□□□□□ -1.08
SMARCA2P51531 AC090506.2-201ENST00000624521 419 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 AL627171.1-201ENST00000618845 1308 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 EIF2AP4-201ENST00000424793 1781 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SMARCA2P51531 MAPK10-372ENST00000641954 3413 ntBASIC8.28□□□□□ -1.08
SMARCA2P51531 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC8.28□□□□□ -1.08
SMARCA2P51531 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SMARCA2P51531 DSTNP2-201ENST00000504533 515 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC8.27□□□□□ -1.09
SMARCA2P51531 RN7SL703P-201ENST00000578485 302 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 AC017100.2-201ENST00000584628 355 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 IPO5P1-202ENST00000600039 287 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 AC091979.2-201ENST00000607514 214 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 AP003400.2-201ENST00000624036 666 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
SMARCA2P51531 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.27□□□□□ -1.09
SMARCA2P51531 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SMARCA2P51531 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SMARCA2P51531 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SMARCA2P51531 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
SMARCA2P51531 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SMARCA2P51531 SNORA62.3-201ENST00000365110 153 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 OR8G2P-201ENST00000412796 908 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.27□□□□□ -1.09
SMARCA2P51531 AC090142.1-201ENST00000465776 462 ntBASIC8.27□□□□□ -1.09
SMARCA2P51531 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SMARCA2P51531 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC8.27□□□□□ -1.09
SMARCA2P51531 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.27□□□□□ -1.09
SMARCA2P51531 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.27□□□□□ -1.09
SMARCA2P51531 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
SMARCA2P51531 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.27□□□□□ -1.09
SMARCA2P51531 AC005261.4-201ENST00000600047 1385 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SMARCA2P51531 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SMARCA2P51531 ALB-202ENST00000401494 1659 ntTSL 5 BASIC8.26□□□□□ -1.09
SMARCA2P51531 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC8.26□□□□□ -1.09
SMARCA2P51531 ICE2P1-201ENST00000512800 1849 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
SMARCA2P51531 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SMARCA2P51531 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SMARCA2P51531 AL137058.3-201ENST00000624531 3099 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SMARCA2P51531 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SMARCA2P51531 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
SMARCA2P51531 AL031119.1-201ENST00000404707 1879 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SMARCA2P51531 COX6CP15-201ENST00000426313 211 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SMARCA2P51531 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.26□□□□□ -1.09
SMARCA2P51531 AGGF1P9-201ENST00000561884 913 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 AP003497.2-201ENST00000624220 967 ntBASIC8.26□□□□□ -1.09
SMARCA2P51531 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SMARCA2P51531 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SMARCA2P51531 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SMARCA2P51531 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SMARCA2P51531 SCARNA15-201ENST00000607520 4325 ntBASIC8.25□□□□□ -1.09
SMARCA2P51531 RNA5SP453-201ENST00000362503 119 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms