Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.39□□□□□ -1.71
CSNK1A1P48729 AC233702.9-201ENST00000581528 203 ntBASIC4.39□□□□□ -1.71
CSNK1A1P48729 AC104687.2-201ENST00000604442 342 ntBASIC4.39□□□□□ -1.71
CSNK1A1P48729 AC087783.2-201ENST00000605070 562 ntBASIC4.39□□□□□ -1.71
CSNK1A1P48729 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.39□□□□□ -1.71
CSNK1A1P48729 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.39□□□□□ -1.71
CSNK1A1P48729 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CSNK1A1P48729 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CSNK1A1P48729 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CSNK1A1P48729 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSNK1A1P48729 AC000123.3-201ENST00000624029 4975 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 RNA5SP305-201ENST00000362665 119 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 RNU4-4P-201ENST00000364588 130 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 RNA5SP105-201ENST00000391123 113 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AL359643.1-201ENST00000404109 423 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AP002530.1-201ENST00000405705 684 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 BX510359.3-201ENST00000422168 306 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 RHOT1P3-201ENST00000436571 331 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 SCAND3P1-201ENST00000439854 1060 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 MYO5BP2-201ENST00000449815 1277 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 RN7SL177P-201ENST00000476596 299 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC004815.1-201ENST00000484185 331 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC116562.1-201ENST00000485355 781 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC093763.2-201ENST00000505334 1223 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 HMGN2P6-201ENST00000551091 273 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AL049830.4-201ENST00000555149 351 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 MEMO1P5-201ENST00000604810 406 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 SDR42E1P1-201ENST00000611327 477 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AP002799.1-201ENST00000623552 423 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC087821.1-201ENST00000623639 567 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC104118.1-201ENST00000607625 1589 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 CASC19-281ENST00000642118 1554 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 MAPK10-320ENST00000641462 6696 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AL022393.1-201ENST00000625142 1677 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 HSPA8P17-201ENST00000427029 1382 ntBASIC4.38□□□□□ -1.71
CSNK1A1P48729 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSNK1A1P48729 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.38□□□□□ -1.71
CSNK1A1P48729 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC083843.3-201ENST00000623679 2186 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 Y_RNA.62-201ENST00000362840 99 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 CHMP1B2P-201ENST00000399581 597 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 RPL23AP27-201ENST00000415161 451 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC092447.2-201ENST00000435487 669 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AP000936.3-201ENST00000438127 255 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 CEACAMP7-201ENST00000444105 496 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 RPS6P2-201ENST00000454208 705 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 RN7SL517P-201ENST00000462240 305 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC026348.1-201ENST00000462549 1053 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 RN7SL97P-201ENST00000486780 299 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC140172.1-201ENST00000502928 141 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 Y_RNA.719-201ENST00000517156 106 ntBASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.37□□□□□ -1.71
CSNK1A1P48729 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms