Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC4.95□□□□□ -1.62
HTTP42858 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 NPM1P34-201ENST00000428821 893 ntBASIC4.95□□□□□ -1.62
HTTP42858 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.95□□□□□ -1.62
HTTP42858 COX6B1P7-201ENST00000430845 235 ntBASIC4.95□□□□□ -1.62
HTTP42858 RNA5SP246-201ENST00000458909 119 ntBASIC4.95□□□□□ -1.62
HTTP42858 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.95□□□□□ -1.62
HTTP42858 AC113403.1-201ENST00000604910 193 ntBASIC4.95□□□□□ -1.62
HTTP42858 AC099669.2-201ENST00000616549 437 ntBASIC4.95□□□□□ -1.62
HTTP42858 CR392039.5-201ENST00000623201 510 ntBASIC4.95□□□□□ -1.62
HTTP42858 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.95□□□□□ -1.62
HTTP42858 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.95□□□□□ -1.62
HTTP42858 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HTTP42858 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC4.95□□□□□ -1.62
HTTP42858 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HTTP42858 ATP5F1P4-201ENST00000397288 746 ntBASIC4.95□□□□□ -1.62
HTTP42858 RGS17P1-201ENST00000423358 553 ntBASIC4.95□□□□□ -1.62
HTTP42858 PLGLA-201ENST00000465668 449 ntBASIC4.95□□□□□ -1.62
HTTP42858 AK4P6-201ENST00000505168 528 ntBASIC4.95□□□□□ -1.62
HTTP42858 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.95□□□□□ -1.62
HTTP42858 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
HTTP42858 AL929601.4-201ENST00000613011 1341 ntBASIC4.95□□□□□ -1.62
HTTP42858 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.95□□□□□ -1.62
HTTP42858 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.95□□□□□ -1.62
HTTP42858 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HTTP42858 MFSD8-236ENST00000641509 4050 ntBASIC4.95□□□□□ -1.62
HTTP42858 MIR183-201ENST00000384958 110 ntBASIC4.94□□□□□ -1.62
HTTP42858 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.94□□□□□ -1.62
HTTP42858 SNRPFP1-201ENST00000414761 252 ntBASIC4.94□□□□□ -1.62
HTTP42858 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.94□□□□□ -1.62
HTTP42858 FKBP1BP1-201ENST00000553366 325 ntBASIC4.94□□□□□ -1.62
HTTP42858 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.94□□□□□ -1.62
HTTP42858 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.94□□□□□ -1.62
HTTP42858 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HTTP42858 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HTTP42858 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.94□□□□□ -1.62
HTTP42858 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.94□□□□□ -1.62
HTTP42858 PCAT14-202ENST00000627127 3935 ntBASIC4.94□□□□□ -1.62
HTTP42858 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.94□□□□□ -1.62
HTTP42858 BOLA3P4-201ENST00000418151 400 ntBASIC4.94□□□□□ -1.62
HTTP42858 GMPSP1-201ENST00000514075 579 ntBASIC4.94□□□□□ -1.62
HTTP42858 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.94□□□□□ -1.62
HTTP42858 AC023762.1-201ENST00000603280 584 ntBASIC4.94□□□□□ -1.62
HTTP42858 AC079587.1-201ENST00000603846 277 ntBASIC4.94□□□□□ -1.62
HTTP42858 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HTTP42858 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HTTP42858 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HTTP42858 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HTTP42858 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HTTP42858 RN7SKP157-201ENST00000516174 282 ntBASIC4.94□□□□□ -1.62
HTTP42858 AC096553.1-201ENST00000605169 829 ntBASIC4.94□□□□□ -1.62
HTTP42858 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.94□□□□□ -1.62
HTTP42858 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HTTP42858 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 UBBP2-201ENST00000376781 231 ntBASIC4.93□□□□□ -1.62
HTTP42858 RNA5SP36-201ENST00000410197 133 ntBASIC4.93□□□□□ -1.62
HTTP42858 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 EIF2S2P5-201ENST00000457635 968 ntBASIC4.93□□□□□ -1.62
HTTP42858 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.93□□□□□ -1.62
HTTP42858 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.93□□□□□ -1.62
HTTP42858 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.93□□□□□ -1.62
HTTP42858 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 AP001002.1-201ENST00000625148 1513 ntBASIC4.93□□□□□ -1.62
HTTP42858 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HTTP42858 MIR331-201ENST00000362302 94 ntBASIC4.93□□□□□ -1.62
HTTP42858 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.93□□□□□ -1.62
HTTP42858 RPL7P2-201ENST00000427639 268 ntBASIC4.93□□□□□ -1.62
HTTP42858 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.93□□□□□ -1.62
HTTP42858 TBCAP1-201ENST00000436520 327 ntBASIC4.93□□□□□ -1.62
HTTP42858 MRPS21P3-201ENST00000436696 262 ntBASIC4.93□□□□□ -1.62
HTTP42858 RNA5SP519-201ENST00000516480 119 ntBASIC4.93□□□□□ -1.62
HTTP42858 AC005412.1-201ENST00000580812 1049 ntBASIC4.93□□□□□ -1.62
HTTP42858 uc_338.13-201ENST00000618243 179 ntBASIC4.93□□□□□ -1.62
HTTP42858 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HTTP42858 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.93□□□□□ -1.62
HTTP42858 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.92□□□□□ -1.62
HTTP42858 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.92□□□□□ -1.62
HTTP42858 RN7SKP13-201ENST00000515933 244 ntBASIC4.92□□□□□ -1.62
HTTP42858 TVP23BP1-201ENST00000557500 617 ntBASIC4.92□□□□□ -1.62
HTTP42858 AL021997.2-201ENST00000615674 271 ntBASIC4.92□□□□□ -1.62
HTTP42858 AL121890.2-201ENST00000617644 465 ntBASIC4.92□□□□□ -1.62
HTTP42858 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms