Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 OR13Z1P-201ENST00000416141 834 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 RPL7AP25-201ENST00000423357 805 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.65□□□□□ -1.5
SCN4AP35499 AC004980.3-201ENST00000447046 365 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 RN7SL303P-201ENST00000469773 251 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 AC108475.1-201ENST00000507880 950 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.65□□□□□ -1.5
SCN4AP35499 AC009852.2-201ENST00000567898 485 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.65□□□□□ -1.5
SCN4AP35499 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
SCN4AP35499 AC108359.1-201ENST00000616451 1211 ntBASIC5.65□□□□□ -1.5
SCN4AP35499 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN4AP35499 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SCN4AP35499 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SCN4AP35499 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN4AP35499 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
SCN4AP35499 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN4AP35499 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
SCN4AP35499 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.65□□□□□ -1.51
SCN4AP35499 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN4AP35499 AC007618.1-201ENST00000366455 732 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 SNORA48.4-201ENST00000391089 134 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AL356095.1-201ENST00000417217 199 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AL136231.1-201ENST00000429407 730 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AC073052.1-201ENST00000440417 714 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AL450023.3-201ENST00000440592 271 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 TCEA1P3-201ENST00000443005 880 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 RN7SL98P-201ENST00000462271 300 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN4AP35499 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN4AP35499 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN4AP35499 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 AC091979.2-201ENST00000607514 214 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SCN4AP35499 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN4AP35499 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 MAPK10-349ENST00000641767 3661 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
SCN4AP35499 TRAV35-201ENST00000390462 330 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 NDUFA5P1-201ENST00000433858 341 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 RPS17P8-201ENST00000434525 335 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AC016772.1-201ENST00000444170 1261 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AC108463.1-201ENST00000450258 347 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN4AP35499 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.64□□□□□ -1.51
SCN4AP35499 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN4AP35499 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN4AP35499 AC010503.3-201ENST00000594355 540 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 AL121932.1-201ENST00000605542 214 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN4AP35499 BX005214.3-202ENST00000619809 325 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 AC090220.1-201ENST00000593078 1699 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.64□□□□□ -1.51
SCN4AP35499 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SCN4AP35499 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN4AP35499 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SCN4AP35499 AL591135.1-201ENST00000401578 5914 ntBASIC5.63□□□□□ -1.51
SCN4AP35499 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN4AP35499 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN4AP35499 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN4AP35499 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN4AP35499 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN4AP35499 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN4AP35499 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN4AP35499 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SCN4AP35499 SPRR2C-201ENST00000290702 219 ntBASIC5.63□□□□□ -1.51
SCN4AP35499 MIR554-201ENST00000384874 96 ntBASIC5.63□□□□□ -1.51
SCN4AP35499 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN4AP35499 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.63□□□□□ -1.51
SCN4AP35499 UQCRHP4-201ENST00000471686 272 ntBASIC5.63□□□□□ -1.51
SCN4AP35499 RN7SL810P-201ENST00000493031 276 ntBASIC5.63□□□□□ -1.51
SCN4AP35499 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 RNU6-709P-201ENST00000517257 104 ntBASIC5.63□□□□□ -1.51
SCN4AP35499 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN4AP35499 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN4AP35499 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms