Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC138701.1-201ENST00000524329 714 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC7.4□□□□□ -1.22
CLIP1P30622 KPNA2P3-201ENST00000584190 848 ntBASIC7.4□□□□□ -1.22
CLIP1P30622 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP1P30622 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP1P30622 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.4□□□□□ -1.23
CLIP1P30622 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CLIP1P30622 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CLIP1P30622 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
CLIP1P30622 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CLIP1P30622 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CLIP1P30622 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.39□□□□□ -1.23
CLIP1P30622 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CLIP1P30622 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CLIP1P30622 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CLIP1P30622 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.39□□□□□ -1.23
CLIP1P30622 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC017079.1-201ENST00000333650 415 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 Y_RNA.126-201ENST00000363382 111 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.39□□□□□ -1.23
CLIP1P30622 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC104651.2-201ENST00000447549 528 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC109327.1-201ENST00000471666 403 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 AC093840.1-201ENST00000511599 336 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC138832.1-201ENST00000522871 556 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.39□□□□□ -1.23
CLIP1P30622 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.39□□□□□ -1.23
CLIP1P30622 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.39□□□□□ -1.23
CLIP1P30622 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC7.39□□□□□ -1.23
CLIP1P30622 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC7.39□□□□□ -1.23
CLIP1P30622 AC091046.3-201ENST00000631455 1574 ntBASIC7.39□□□□□ -1.23
CLIP1P30622 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CLIP1P30622 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CLIP1P30622 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC7.39□□□□□ -1.23
CLIP1P30622 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CLIP1P30622 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CLIP1P30622 AC009951.1-201ENST00000623674 2614 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC7.38□□□□□ -1.23
CLIP1P30622 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 PPIAP21-201ENST00000464473 501 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 AC015795.1-201ENST00000513669 327 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.38□□□□□ -1.23
CLIP1P30622 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.38□□□□□ -1.23
CLIP1P30622 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CLIP1P30622 VN2R3P-201ENST00000422626 1412 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 RAD17P1-201ENST00000418130 2042 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.38□□□□□ -1.23
CLIP1P30622 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CLIP1P30622 ZNF402P-201ENST00000404435 3100 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 AC120338.1-201ENST00000625074 1541 ntBASIC7.38□□□□□ -1.23
CLIP1P30622 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CLIP1P30622 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.37□□□□□ -1.23
CLIP1P30622 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.37□□□□□ -1.23
CLIP1P30622 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CLIP1P30622 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.37□□□□□ -1.23
CLIP1P30622 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.37□□□□□ -1.23
CLIP1P30622 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC7.37□□□□□ -1.23
CLIP1P30622 MIR3160-1-201ENST00000577972 85 ntBASIC7.37□□□□□ -1.23
CLIP1P30622 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.37□□□□□ -1.23
CLIP1P30622 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 AC092653.1-201ENST00000608509 531 ntBASIC7.37□□□□□ -1.23
CLIP1P30622 AC012409.3-201ENST00000611343 981 ntBASIC7.37□□□□□ -1.23
CLIP1P30622 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 AL049536.1-201ENST00000625043 744 ntBASIC7.37□□□□□ -1.23
CLIP1P30622 AC068724.3-201ENST00000625906 87 ntBASIC7.37□□□□□ -1.23
CLIP1P30622 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.37□□□□□ -1.23
CLIP1P30622 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.37□□□□□ -1.23
CLIP1P30622 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
CLIP1P30622 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CLIP1P30622 CCT8P1-201ENST00000413611 1657 ntBASIC7.37□□□□□ -1.23
CLIP1P30622 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC7.37□□□□□ -1.23
CLIP1P30622 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CLIP1P30622 RNA5SP509-201ENST00000364577 119 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CLIP1P30622 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.36□□□□□ -1.23
CLIP1P30622 RPL7AP10-201ENST00000481016 791 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 AK4P6-201ENST00000505168 528 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 AC020937.1-201ENST00000519677 1013 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 GTF2IP11-201ENST00000526931 420 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CLIP1P30622 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.36□□□□□ -1.23
CLIP1P30622 AC074050.1-201ENST00000563247 211 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 AC023575.1-201ENST00000580510 358 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 MIR6716-201ENST00000613413 80 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms