Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.29□□□□□ -1.72
USF1P22415 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.29□□□□□ -1.72
USF1P22415 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 BNIP3P1-201ENST00000547295 580 ntBASIC4.29□□□□□ -1.72
USF1P22415 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.29□□□□□ -1.72
USF1P22415 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.29□□□□□ -1.72
USF1P22415 NMNAT1P1-201ENST00000554095 876 ntBASIC4.29□□□□□ -1.72
USF1P22415 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.29□□□□□ -1.72
USF1P22415 AC009117.1-201ENST00000563948 554 ntBASIC4.29□□□□□ -1.72
USF1P22415 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.29□□□□□ -1.72
USF1P22415 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.29□□□□□ -1.72
USF1P22415 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.29□□□□□ -1.72
USF1P22415 MIR4270-201ENST00000581799 70 ntBASIC4.29□□□□□ -1.72
USF1P22415 PRPF19P1-201ENST00000584766 898 ntBASIC4.29□□□□□ -1.72
USF1P22415 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
USF1P22415 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.29□□□□□ -1.72
USF1P22415 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.29□□□□□ -1.72
USF1P22415 AL161616.1-201ENST00000611867 286 ntBASIC4.29□□□□□ -1.72
USF1P22415 MIR6839-201ENST00000620425 113 ntBASIC4.29□□□□□ -1.72
USF1P22415 AC087821.1-201ENST00000623639 567 ntBASIC4.29□□□□□ -1.72
USF1P22415 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.29□□□□□ -1.72
USF1P22415 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 SDAD1P1-202ENST00000524156 2051 ntBASIC4.29□□□□□ -1.72
USF1P22415 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USF1P22415 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
USF1P22415 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.29□□□□□ -1.72
USF1P22415 SCN1A-220ENST00000641603 12506 ntBASIC4.29□□□□□ -1.72
USF1P22415 IRF5P1-201ENST00000504852 2164 ntBASIC4.29□□□□□ -1.72
USF1P22415 TRIM51GP-201ENST00000534741 1350 ntBASIC4.28□□□□□ -1.72
USF1P22415 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 RNA5SP428-201ENST00000365129 132 ntBASIC4.28□□□□□ -1.72
USF1P22415 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 AC007618.1-201ENST00000366455 732 ntBASIC4.28□□□□□ -1.72
USF1P22415 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USF1P22415 RPL21P67-201ENST00000402896 478 ntBASIC4.28□□□□□ -1.72
USF1P22415 COX5BP7-201ENST00000414780 274 ntBASIC4.28□□□□□ -1.72
USF1P22415 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.28□□□□□ -1.72
USF1P22415 AL590139.1-201ENST00000416267 400 ntBASIC4.28□□□□□ -1.72
USF1P22415 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USF1P22415 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 AL138878.2-201ENST00000440581 1241 ntBASIC4.28□□□□□ -1.72
USF1P22415 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.28□□□□□ -1.72
USF1P22415 AC112498.1-201ENST00000444401 332 ntBASIC4.28□□□□□ -1.72
USF1P22415 PRPF38AP1-201ENST00000451976 933 ntBASIC4.28□□□□□ -1.72
USF1P22415 RPS29P33-201ENST00000456717 146 ntBASIC4.28□□□□□ -1.72
USF1P22415 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 AC245028.2-201ENST00000458673 253 ntBASIC4.28□□□□□ -1.72
USF1P22415 AC093827.1-201ENST00000480094 861 ntBASIC4.28□□□□□ -1.72
USF1P22415 RN7SL319P-201ENST00000480656 221 ntBASIC4.28□□□□□ -1.72
USF1P22415 OR9N1P-201ENST00000491296 333 ntBASIC4.28□□□□□ -1.72
USF1P22415 MYL12BP2-201ENST00000503948 512 ntBASIC4.28□□□□□ -1.72
USF1P22415 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.28□□□□□ -1.72
USF1P22415 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.28□□□□□ -1.72
USF1P22415 SNORD116-30-201ENST00000516468 85 ntBASIC4.28□□□□□ -1.72
USF1P22415 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.28□□□□□ -1.72
USF1P22415 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.28□□□□□ -1.72
USF1P22415 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.28□□□□□ -1.72
USF1P22415 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.28□□□□□ -1.72
USF1P22415 AC011270.1-201ENST00000558606 583 ntBASIC4.28□□□□□ -1.72
USF1P22415 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.28□□□□□ -1.72
USF1P22415 BGLT3-201ENST00000564523 994 ntBASIC4.28□□□□□ -1.72
USF1P22415 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 AP005131.7-201ENST00000610087 611 ntBASIC4.28□□□□□ -1.72
USF1P22415 AL627230.1-201ENST00000613077 211 ntBASIC4.28□□□□□ -1.72
USF1P22415 uc_338.18-201ENST00000615451 175 ntBASIC4.28□□□□□ -1.72
USF1P22415 AL591926.8-201ENST00000616876 211 ntBASIC4.28□□□□□ -1.72
USF1P22415 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.28□□□□□ -1.72
USF1P22415 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
USF1P22415 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USF1P22415 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.28□□□□□ -1.72
USF1P22415 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.28□□□□□ -1.72
USF1P22415 AC132825.1-201ENST00000463573 2247 ntBASIC4.27□□□□□ -1.73
USF1P22415 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.27□□□□□ -1.73
USF1P22415 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
USF1P22415 AC027228.2-201ENST00000567141 2154 ntBASIC4.27□□□□□ -1.73
USF1P22415 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USF1P22415 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
USF1P22415 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USF1P22415 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms