Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SNORA43.1-201ENST00000364863 140 ntBASIC7.06□□□□□ -1.28
LIG1P18858 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 ATP5F1P4-201ENST00000397288 746 ntBASIC7.06□□□□□ -1.28
LIG1P18858 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 AL161449.1-201ENST00000414531 1199 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AL513325.1-201ENST00000417716 1034 ntBASIC7.06□□□□□ -1.28
LIG1P18858 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 MRPS21P2-201ENST00000424704 264 ntBASIC7.06□□□□□ -1.28
LIG1P18858 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 USP24P1-201ENST00000433802 779 ntBASIC7.06□□□□□ -1.28
LIG1P18858 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 AL353898.1-201ENST00000444055 238 ntBASIC7.06□□□□□ -1.28
LIG1P18858 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.06□□□□□ -1.28
LIG1P18858 ZNF114P1-201ENST00000453500 292 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 AC104971.1-201ENST00000495117 578 ntBASIC7.06□□□□□ -1.28
LIG1P18858 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 HNRNPKP5-201ENST00000515300 253 ntBASIC7.06□□□□□ -1.28
LIG1P18858 SNORA31.13-201ENST00000516624 135 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 OR6M2P-201ENST00000529831 871 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AL139174.1-201ENST00000531489 886 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.06□□□□□ -1.28
LIG1P18858 HIGD1AP17-201ENST00000554576 276 ntBASIC7.06□□□□□ -1.28
LIG1P18858 MIR3154-201ENST00000577829 84 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 RPSAP75-201ENST00000605848 301 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AC006270.3-201ENST00000605967 1036 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AC010678.1-201ENST00000614118 713 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.06□□□□□ -1.28
LIG1P18858 AC073569.3-201ENST00000619055 682 ntBASIC7.06□□□□□ -1.28
LIG1P18858 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 AC015722.2-201ENST00000622210 551 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 AC010325.3-201ENST00000641084 394 ntBASIC7.06□□□□□ -1.28
LIG1P18858 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
LIG1P18858 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.06□□□□□ -1.28
LIG1P18858 AP001284.1-201ENST00000528393 2118 ntBASIC7.06□□□□□ -1.28
LIG1P18858 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
LIG1P18858 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LIG1P18858 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.05□□□□□ -1.28
LIG1P18858 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG1P18858 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 AL133243.2-201ENST00000610331 1621 ntBASIC7.05□□□□□ -1.28
LIG1P18858 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
LIG1P18858 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
LIG1P18858 LINC01613-201ENST00000561476 2780 ntBASIC7.05□□□□□ -1.28
LIG1P18858 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG1P18858 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
LIG1P18858 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIG1P18858 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
LIG1P18858 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LIG1P18858 AL672167.2-201ENST00000377164 879 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG1P18858 NENFP1-201ENST00000419476 466 ntBASIC7.05□□□□□ -1.28
LIG1P18858 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.05□□□□□ -1.28
LIG1P18858 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.05□□□□□ -1.28
LIG1P18858 AL590103.1-201ENST00000434488 307 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AL731534.1-201ENST00000434711 269 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.05□□□□□ -1.28
LIG1P18858 MORF4-201ENST00000447135 971 ntBASIC7.05□□□□□ -1.28
LIG1P18858 HMGB1P5-202ENST00000451497 985 ntBASIC7.05□□□□□ -1.28
LIG1P18858 snoU13.29-201ENST00000459370 104 ntBASIC7.05□□□□□ -1.28
LIG1P18858 RN7SL552P-201ENST00000462094 276 ntBASIC7.05□□□□□ -1.28
LIG1P18858 GAPDHP36-201ENST00000480688 918 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.05□□□□□ -1.28
LIG1P18858 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 AC010343.2-201ENST00000510162 224 ntBASIC7.05□□□□□ -1.28
LIG1P18858 CYP4F27P-201ENST00000514557 494 ntBASIC7.05□□□□□ -1.28
LIG1P18858 RNU6-405P-201ENST00000516637 110 ntBASIC7.05□□□□□ -1.28
LIG1P18858 RNA5SP206-201ENST00000516703 121 ntBASIC7.05□□□□□ -1.28
LIG1P18858 snoZ278.1-201ENST00000517059 112 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AC106038.2-201ENST00000520706 568 ntBASIC7.05□□□□□ -1.28
LIG1P18858 CYCSP25-201ENST00000525280 316 ntBASIC7.05□□□□□ -1.28
LIG1P18858 OR5AZ1P-201ENST00000527448 943 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LIG1P18858 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.05□□□□□ -1.28
LIG1P18858 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.05□□□□□ -1.28
LIG1P18858 AL591167.1-201ENST00000607321 456 ntBASIC7.05□□□□□ -1.28
LIG1P18858 AC097505.1-201ENST00000610199 565 ntBASIC7.05□□□□□ -1.28
LIG1P18858 MIR6721-201ENST00000617181 87 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms