Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 AC003985.2-201ENST00000562268 1669 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA1P02708 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA1P02708 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 RNU4-44P-201ENST00000363050 141 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 SNORA70F-201ENST00000384142 135 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 AL049697.2-201ENST00000403708 294 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 AL356968.2-201ENST00000412769 1257 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 P2RY10P2-201ENST00000416730 913 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.35□□□□□ -1.55
CHRNA1P02708 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA1P02708 RPS5P7-201ENST00000456664 608 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 RN7SL385P-201ENST00000468873 276 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA1P02708 AC016687.1-201ENST00000482574 353 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 ENPP7P9-201ENST00000514456 627 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA1P02708 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA1P02708 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.35□□□□□ -1.55
CHRNA1P02708 AC022726.1-201ENST00000587475 207 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 AC008833.1-201ENST00000611633 691 ntBASIC5.35□□□□□ -1.55
CHRNA1P02708 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA1P02708 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA1P02708 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA1P02708 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA1P02708 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHRNA1P02708 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 DHX40P1-201ENST00000588725 1412 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA1P02708 RPL12P9-201ENST00000412942 488 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA1P02708 RPS27AP7-201ENST00000422792 455 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 RPL18P10-201ENST00000425606 538 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA1P02708 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CHRNA1P02708 AL589765.3-201ENST00000446084 462 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 AL591363.1-201ENST00000450091 483 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 OR9N1P-201ENST00000491296 333 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 AL133372.1-201ENST00000493565 745 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.34□□□□□ -1.55
CHRNA1P02708 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA1P02708 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 AP005901.4-201ENST00000577336 569 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 MTCYBP13-201ENST00000578634 1093 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.34□□□□□ -1.55
CHRNA1P02708 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.34□□□□□ -1.55
CHRNA1P02708 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.34□□□□□ -1.55
CHRNA1P02708 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
CHRNA1P02708 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 CUL4AP1-201ENST00000514750 1863 ntBASIC5.34□□□□□ -1.55
CHRNA1P02708 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA1P02708 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.34□□□□□ -1.55
CHRNA1P02708 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CHRNA1P02708 MTND5P23-201ENST00000430812 1655 ntBASIC5.34□□□□□ -1.56
CHRNA1P02708 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
CHRNA1P02708 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 AL450345.1-202ENST00000605741 3881 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA1P02708 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA1P02708 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA1P02708 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 AC026951.1-201ENST00000559530 2459 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA1P02708 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 OR4K15-201ENST00000305051 1216 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 RPL32P3-201ENST00000359025 275 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AC007618.1-201ENST00000366455 732 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms