Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DHX9P1-201ENST00000436565 3076 ntBASIC5.65□□□□□ -1.5
COL1A1P02452 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.65□□□□□ -1.5
COL1A1P02452 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL1A1P02452 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL1A1P02452 RAD17P1-201ENST00000418130 2042 ntBASIC5.65□□□□□ -1.51
COL1A1P02452 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL1A1P02452 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL1A1P02452 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL1A1P02452 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL1A1P02452 VN2R3P-201ENST00000422626 1412 ntBASIC5.65□□□□□ -1.51
COL1A1P02452 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.65□□□□□ -1.51
COL1A1P02452 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL1A1P02452 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.64□□□□□ -1.51
COL1A1P02452 RNA5SP515-201ENST00000364570 118 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL1A1P02452 OR6C69P-201ENST00000394268 893 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.64□□□□□ -1.51
COL1A1P02452 E2F6P2-201ENST00000420708 748 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.64□□□□□ -1.51
COL1A1P02452 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.64□□□□□ -1.51
COL1A1P02452 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.64□□□□□ -1.51
COL1A1P02452 TCEA1P3-201ENST00000443005 880 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AC010618.1-201ENST00000469924 477 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 RN7SL604P-201ENST00000492589 296 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.64□□□□□ -1.51
COL1A1P02452 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
COL1A1P02452 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.64□□□□□ -1.51
COL1A1P02452 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.64□□□□□ -1.51
COL1A1P02452 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.64□□□□□ -1.51
COL1A1P02452 AC012409.3-201ENST00000611343 981 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL1A1P02452 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.64□□□□□ -1.51
COL1A1P02452 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL1A1P02452 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.64□□□□□ -1.51
COL1A1P02452 ZNF137P-201ENST00000456718 1920 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL1A1P02452 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.64□□□□□ -1.51
COL1A1P02452 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL1A1P02452 FTH1P16-201ENST00000435241 552 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 CBX1P1-201ENST00000440184 427 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 RPL7AP52-201ENST00000458096 790 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 RPL23AP24-201ENST00000458203 385 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 SNRPCP3-201ENST00000474888 476 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL1A1P02452 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.64□□□□□ -1.51
COL1A1P02452 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.64□□□□□ -1.51
COL1A1P02452 AL109618.2-201ENST00000605527 211 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AL035461.2-201ENST00000619201 524 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 AL049536.1-201ENST00000625043 744 ntBASIC5.64□□□□□ -1.51
COL1A1P02452 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL1A1P02452 AC007998.4-201ENST00000612496 2533 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL1A1P02452 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 AL034370.1-201ENST00000397254 1590 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 AC097063.1-201ENST00000426714 1797 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL1A1P02452 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 AP000432.2-201ENST00000624164 2048 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.63□□□□□ -1.51
COL1A1P02452 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.63□□□□□ -1.51
COL1A1P02452 RPL7AP25-201ENST00000423357 805 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.63□□□□□ -1.51
COL1A1P02452 MRPS21P3-201ENST00000436696 262 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.63□□□□□ -1.51
COL1A1P02452 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.63□□□□□ -1.51
COL1A1P02452 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.63□□□□□ -1.51
COL1A1P02452 AC090602.1-201ENST00000469695 252 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
COL1A1P02452 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.63□□□□□ -1.51
COL1A1P02452 AC084783.1-201ENST00000565846 910 ntBASIC5.63□□□□□ -1.51
COL1A1P02452 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.63□□□□□ -1.51
COL1A1P02452 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.63□□□□□ -1.51
COL1A1P02452 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL1A1P02452 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL1A1P02452 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL1A1P02452 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL1A1P02452 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL1A1P02452 AP002512.4-202ENST00000641599 4530 ntBASIC5.62□□□□□ -1.51
COL1A1P02452 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL1A1P02452 SNORA11C-201ENST00000408532 129 ntBASIC5.62□□□□□ -1.51
COL1A1P02452 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL1A1P02452 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.62□□□□□ -1.51
COL1A1P02452 TMBIM7P-201ENST00000418074 855 ntBASIC5.62□□□□□ -1.51
COL1A1P02452 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.62□□□□□ -1.51
COL1A1P02452 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.62□□□□□ -1.51
COL1A1P02452 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 298.8 ms