Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNA5SP319-201ENST00000362768 119 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNU6-1320P-201ENST00000390838 107 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNU6-1269P-201ENST00000391139 107 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 ATG4AP1-201ENST00000416893 538 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC007064.3-201ENST00000422608 359 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC002504.1-201ENST00000438281 691 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC105399.1-202ENST00000447303 205 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 LDHBP2-201ENST00000456969 1005 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNU6-599P-201ENST00000459383 107 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNU6-1193P-201ENST00000459461 107 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RN7SL443P-201ENST00000464331 290 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC100770.1-201ENST00000532310 322 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC069240.1-201ENST00000548774 375 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC087477.6-201ENST00000559595 843 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC018552.1-201ENST00000562099 811 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 MIR4505-201ENST00000582238 73 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC027243.2-201ENST00000602530 724 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC133552.5-201ENST00000604266 540 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC104687.2-201ENST00000604442 342 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC012213.4-201ENST00000606457 354 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 LINC00901.1-201ENST00000617252 152 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNU6-368P-201ENST00000620928 107 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC127024.6-201ENST00000621598 424 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 RNU6-538P-201ENST00000622329 107 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AL691477.1-201ENST00000624398 162 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 AC092747.4-201ENST00000620519 1861 ntBASIC3.68□□□□□ -1.82
HLA-DQA1P01909 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQA1P01909 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 HSPD1P14-201ENST00000432666 1618 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 PANDAR-201ENST00000629595 1506 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 MIR323A-201ENST00000362199 86 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 RN7SKP224-201ENST00000364140 325 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 SNORA16A-201ENST00000384342 137 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AL645733.1-201ENST00000402250 217 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC093155.2-201ENST00000420734 937 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 OR2AM1P-201ENST00000422137 422 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC079807.1-201ENST00000429993 481 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 Z85994.2-201ENST00000434327 452 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 SUMO2P3-201ENST00000438311 288 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AL450023.3-201ENST00000440592 271 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC104651.2-201ENST00000447549 528 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 RAB28P3-201ENST00000448325 597 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 RPS17P2-201ENST00000461663 408 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 SIAH1P1-201ENST00000479411 923 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC104109.1-201ENST00000498563 436 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC138866.2-201ENST00000508650 584 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 PPBPP1-201ENST00000510807 373 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC012400.1-201ENST00000518452 381 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 DYNLL1P4-201ENST00000549314 266 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC027455.1-201ENST00000574104 594 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 BNIP3P7-201ENST00000605641 516 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AL590410.1-201ENST00000617925 333 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC015804.1-201ENST00000622935 435 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC007683.2-201ENST00000624681 714 ntBASIC3.67□□□□□ -1.82
HLA-DQA1P01909 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms