Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE4BO95155 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBE4BO95155 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.35□□□□□ -1.55
UBE4BO95155 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.34□□□□□ -1.55
UBE4BO95155 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE4BO95155 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
UBE4BO95155 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE4BO95155 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
UBE4BO95155 AC008549.2-201ENST00000333482 706 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RNU6-1320P-201ENST00000390838 107 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RNU6-1269P-201ENST00000391139 107 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AL589647.1-201ENST00000402485 466 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RN7SKP125-201ENST00000410481 302 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AC114755.2-201ENST00000413520 361 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.34□□□□□ -1.55
UBE4BO95155 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE4BO95155 RCC2P2-201ENST00000422174 918 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 PRPF38AP2-201ENST00000438179 851 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AL772161.1-201ENST00000439130 476 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE4BO95155 MRPL48P1-201ENST00000445390 636 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 ZFRP1-201ENST00000457579 2970 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RNU6-599P-201ENST00000459383 107 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RNU6-1193P-201ENST00000459461 107 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RPL23AP56-201ENST00000460778 453 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 HMGN1P8-201ENST00000463578 288 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 SEPT7P6-201ENST00000469999 1143 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.34□□□□□ -1.55
UBE4BO95155 RNA5SP303-201ENST00000516192 130 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AC008676.3-201ENST00000521237 435 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 MTND2P13-201ENST00000577438 1039 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 MIR4472-2-201ENST00000582069 67 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.34□□□□□ -1.55
UBE4BO95155 AL022401.1-201ENST00000619498 108 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RNU6-368P-201ENST00000620928 107 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 RNU6-538P-201ENST00000622329 107 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AC073342.3-201ENST00000624211 193 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.34□□□□□ -1.55
UBE4BO95155 AL022393.1-201ENST00000625142 1677 ntBASIC5.34□□□□□ -1.55
UBE4BO95155 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
UBE4BO95155 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE4BO95155 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE4BO95155 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UBE4BO95155 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
UBE4BO95155 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.34□□□□□ -1.55
UBE4BO95155 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.34□□□□□ -1.56
UBE4BO95155 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.33□□□□□ -1.56
UBE4BO95155 AC000374.1-201ENST00000434698 1745 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AL672167.1-204ENST00000641875 3017 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
UBE4BO95155 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE4BO95155 TCP1P3-201ENST00000414406 1498 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AL133270.1-201ENST00000402635 279 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE4BO95155 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE4BO95155 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 LINC00993-201ENST00000420453 540 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 ARAFP1-201ENST00000422172 605 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 RGS17P1-201ENST00000423358 553 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 EIF4HP2-201ENST00000424380 563 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 OR2AH1P-201ENST00000425717 928 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE4BO95155 AL451139.1-201ENST00000434718 346 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 AC090686.1-201ENST00000481577 749 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE4BO95155 AC091917.2-201ENST00000505002 744 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
UBE4BO95155 RNU6-513P-201ENST00000516104 104 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE4BO95155 BUD31P1-201ENST00000521828 359 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 OR5AZ1P-201ENST00000527448 943 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 GCSHP4-201ENST00000538792 439 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AL121932.1-201ENST00000605542 214 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AC012557.1-201ENST00000607115 611 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE4BO95155 AL731532.2-201ENST00000623542 1953 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 CASC19-206ENST00000641028 1430 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.33□□□□□ -1.56
UBE4BO95155 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
UBE4BO95155 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE4BO95155 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.33□□□□□ -1.56
UBE4BO95155 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.33□□□□□ -1.56
UBE4BO95155 AL359922.3-201ENST00000624779 1670 ntBASIC5.33□□□□□ -1.56
UBE4BO95155 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE4BO95155 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE4BO95155 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE4BO95155 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE4BO95155 RNU6-729P-201ENST00000384399 107 ntBASIC5.32□□□□□ -1.56
UBE4BO95155 AP000580.1-201ENST00000404439 358 ntBASIC5.32□□□□□ -1.56
UBE4BO95155 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.32□□□□□ -1.56
UBE4BO95155 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE4BO95155 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms