Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP003049.1-201ENST00000529418 457 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX3O60493 AL049872.1-201ENST00000556323 322 ntBASIC4.85□□□□□ -1.63
SNX3O60493 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX3O60493 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.85□□□□□ -1.63
SNX3O60493 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 MIR5010-201ENST00000582846 120 ntBASIC4.85□□□□□ -1.63
SNX3O60493 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX3O60493 AC084373.1-201ENST00000603311 235 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AC135178.6-201ENST00000605314 398 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AL096803.3-201ENST00000609032 532 ntBASIC4.85□□□□□ -1.63
SNX3O60493 MIR6813-201ENST00000621638 56 ntBASIC4.85□□□□□ -1.63
SNX3O60493 AC055839.1-201ENST00000634467 498 ntBASIC4.85□□□□□ -1.63
SNX3O60493 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SNX3O60493 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNX3O60493 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX3O60493 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.63
SNX3O60493 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 AC106872.5-201ENST00000508856 1416 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AC235565.1-201ENST00000456962 1325 ntBASIC4.84□□□□□ -1.63
SNX3O60493 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 RNA5SP335-201ENST00000363817 110 ntBASIC4.84□□□□□ -1.63
SNX3O60493 OR6K3-202ENST00000368146 996 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AC104297.1-201ENST00000393779 870 ntBASIC4.84□□□□□ -1.63
SNX3O60493 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 MIR921-201ENST00000401133 56 ntBASIC4.84□□□□□ -1.63
SNX3O60493 RPL5P19-201ENST00000404228 893 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 OR2X1P-201ENST00000421144 687 ntBASIC4.84□□□□□ -1.63
SNX3O60493 RPL23AP4-201ENST00000427757 463 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 AP000949.1-201ENST00000438328 629 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AL157827.1-201ENST00000447622 132 ntBASIC4.84□□□□□ -1.63
SNX3O60493 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AC092691.2-201ENST00000461787 803 ntBASIC4.84□□□□□ -1.63
SNX3O60493 ATP5G1P3-201ENST00000463301 410 ntBASIC4.84□□□□□ -1.63
SNX3O60493 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX3O60493 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 SNORA26.10-201ENST00000516427 141 ntBASIC4.84□□□□□ -1.63
SNX3O60493 Y_RNA.719-201ENST00000517156 106 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AC103833.1-201ENST00000517442 172 ntBASIC4.84□□□□□ -1.63
SNX3O60493 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 AC022826.1-201ENST00000519383 805 ntBASIC4.84□□□□□ -1.63
SNX3O60493 MTND1P36-201ENST00000522384 936 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX3O60493 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 AC024940.3-201ENST00000538551 316 ntBASIC4.84□□□□□ -1.63
SNX3O60493 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
SNX3O60493 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 AL845552.1-201ENST00000556820 323 ntBASIC4.84□□□□□ -1.63
SNX3O60493 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX3O60493 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 KATNBL1P5-201ENST00000605015 517 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AC005828.7-201ENST00000607331 556 ntBASIC4.84□□□□□ -1.63
SNX3O60493 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX3O60493 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 SNX18P1Y-201ENST00000616231 511 ntBASIC4.84□□□□□ -1.63
SNX3O60493 AL122125.1-201ENST00000616999 600 ntBASIC4.84□□□□□ -1.63
SNX3O60493 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX3O60493 MIR193BHG-214ENST00000641765 509 ntBASIC4.84□□□□□ -1.63
SNX3O60493 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX3O60493 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX3O60493 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX3O60493 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SNX3O60493 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SNX3O60493 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.84□□□□□ -1.64
SNX3O60493 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.84□□□□□ -1.64
SNX3O60493 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.83□□□□□ -1.64
SNX3O60493 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNX3O60493 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.83□□□□□ -1.64
SNX3O60493 RNU1-108P-201ENST00000362556 161 ntBASIC4.83□□□□□ -1.64
SNX3O60493 OR6E1P-201ENST00000414424 923 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms