Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 AC011447.7-201ENST00000624228 1590 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC100757.1-201ENST00000616872 1835 ntBASIC4.85□□□□□ -1.63
SSX4O60224 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 SMG1P7-201ENST00000565246 2704 ntBASIC4.85□□□□□ -1.63
SSX4O60224 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX4O60224 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 OR1L6-202ENST00000373684 1044 ntBASIC4.84□□□□□ -1.63
SSX4O60224 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 RNU6-171P-201ENST00000384354 107 ntBASIC4.84□□□□□ -1.63
SSX4O60224 RPS27AP11-201ENST00000402798 447 ntBASIC4.84□□□□□ -1.63
SSX4O60224 MIR1286-201ENST00000408112 78 ntBASIC4.84□□□□□ -1.63
SSX4O60224 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX4O60224 RN7SKP222-201ENST00000410651 315 ntBASIC4.84□□□□□ -1.63
SSX4O60224 SETP15-201ENST00000412724 337 ntBASIC4.84□□□□□ -1.63
SSX4O60224 OR6C64P-201ENST00000419708 825 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AL133173.1-201ENST00000423458 397 ntBASIC4.84□□□□□ -1.63
SSX4O60224 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.84□□□□□ -1.63
SSX4O60224 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.84□□□□□ -1.63
SSX4O60224 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.84□□□□□ -1.63
SSX4O60224 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.84□□□□□ -1.63
SSX4O60224 MEMO1P4-201ENST00000453590 386 ntBASIC4.84□□□□□ -1.63
SSX4O60224 RPS20P4-201ENST00000461659 355 ntBASIC4.84□□□□□ -1.63
SSX4O60224 RN7SL51P-201ENST00000468230 285 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC096741.1-201ENST00000472250 846 ntBASIC4.84□□□□□ -1.63
SSX4O60224 CYCSP20-201ENST00000473154 315 ntBASIC4.84□□□□□ -1.63
SSX4O60224 RPL7P39-201ENST00000481157 744 ntBASIC4.84□□□□□ -1.63
SSX4O60224 RPL32P9-201ENST00000487963 407 ntBASIC4.84□□□□□ -1.63
SSX4O60224 NIFKP7-201ENST00000503365 834 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC021106.1-201ENST00000509020 1058 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC091912.1-201ENST00000511351 248 ntBASIC4.84□□□□□ -1.63
SSX4O60224 RFPL4AP5-201ENST00000514977 504 ntBASIC4.84□□□□□ -1.63
SSX4O60224 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 RNU6-1004P-201ENST00000516584 111 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX4O60224 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.84□□□□□ -1.63
SSX4O60224 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AC104229.1-201ENST00000561364 255 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 AP005262.1-201ENST00000582646 997 ntBASIC4.84□□□□□ -1.63
SSX4O60224 SS18L2P2-201ENST00000583960 235 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX4O60224 BNIP3P27-201ENST00000599991 412 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC024933.1-201ENST00000608472 348 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC090607.5-201ENST00000615692 224 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC018926.1-201ENST00000616335 435 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC016769.4-201ENST00000616893 535 ntBASIC4.84□□□□□ -1.63
SSX4O60224 AC008115.4-201ENST00000619780 775 ntBASIC4.84□□□□□ -1.63
SSX4O60224 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX4O60224 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX4O60224 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
SSX4O60224 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.84□□□□□ -1.64
SSX4O60224 AL606537.1-201ENST00000607258 2011 ntBASIC4.84□□□□□ -1.64
SSX4O60224 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSX4O60224 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.83□□□□□ -1.64
SSX4O60224 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.83□□□□□ -1.64
SSX4O60224 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 AL590763.1-201ENST00000398297 1545 ntBASIC4.83□□□□□ -1.64
SSX4O60224 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.83□□□□□ -1.64
SSX4O60224 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX4O60224 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX4O60224 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 HSPA8P17-201ENST00000427029 1382 ntBASIC4.83□□□□□ -1.64
SSX4O60224 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSX4O60224 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX4O60224 SNORA70-201ENST00000384436 135 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms