Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LDB2O43679 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LDB2O43679 RNA5SP223-201ENST00000365174 120 ntBASIC5.2□□□□□ -1.58
LDB2O43679 TAF9BP2-201ENST00000400856 499 ntBASIC5.2□□□□□ -1.58
LDB2O43679 BX664727.1-201ENST00000416024 466 ntBASIC5.2□□□□□ -1.58
LDB2O43679 OR51A6P-201ENST00000418680 1004 ntBASIC5.2□□□□□ -1.58
LDB2O43679 SLC35E1P1-201ENST00000419313 864 ntBASIC5.2□□□□□ -1.58
LDB2O43679 REREP1Y-201ENST00000422655 198 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 AC009238.2-201ENST00000431026 355 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 OR52B5P-201ENST00000435337 951 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 REREP2Y-201ENST00000439103 200 ntBASIC5.2□□□□□ -1.58
LDB2O43679 RPS29P10-201ENST00000439197 166 ntBASIC5.2□□□□□ -1.58
LDB2O43679 MTND1P26-201ENST00000440488 538 ntBASIC5.2□□□□□ -1.58
LDB2O43679 RRM2P4-201ENST00000441721 562 ntBASIC5.2□□□□□ -1.58
LDB2O43679 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.2□□□□□ -1.58
LDB2O43679 AURKAPS1-201ENST00000451805 1212 ntBASIC5.2□□□□□ -1.58
LDB2O43679 RN7SL172P-201ENST00000460535 303 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC008379.1-201ENST00000463655 464 ntBASIC5.2□□□□□ -1.58
LDB2O43679 RN7SL610P-201ENST00000463845 291 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC104982.1-201ENST00000478775 574 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 AL049874.2-201ENST00000492636 288 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC021087.2-201ENST00000504656 1203 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC097173.1-201ENST00000505862 819 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC006499.3-201ENST00000506077 748 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 AC100784.1-201ENST00000522790 310 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 AP003066.2-201ENST00000529375 555 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 AL512310.9-201ENST00000553311 948 ntBASIC5.2□□□□□ -1.58
LDB2O43679 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 AC025918.2-201ENST00000558683 763 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC009712.1-201ENST00000564938 316 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC090666.1-201ENST00000578241 445 ntBASIC5.2□□□□□ -1.58
LDB2O43679 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
LDB2O43679 AC079880.2-201ENST00000603790 1213 ntBASIC5.2□□□□□ -1.58
LDB2O43679 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 AP005432.2-201ENST00000608162 586 ntBASIC5.2□□□□□ -1.58
LDB2O43679 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 AC135068.12-201ENST00000637370 931 ntBASIC5.2□□□□□ -1.58
LDB2O43679 OR52B5P-202ENST00000641118 1110 ntBASIC5.2□□□□□ -1.58
LDB2O43679 MRRFP1-201ENST00000435941 1675 ntBASIC5.2□□□□□ -1.58
LDB2O43679 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.2□□□□□ -1.58
LDB2O43679 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.2□□□□□ -1.58
LDB2O43679 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDB2O43679 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 AC125336.1-201ENST00000508893 2827 ntBASIC5.19□□□□□ -1.58
LDB2O43679 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDB2O43679 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 ADAM5-202ENST00000399789 1942 ntBASIC5.19□□□□□ -1.58
LDB2O43679 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDB2O43679 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LDB2O43679 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LDB2O43679 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 SNORA70-201ENST00000384436 135 ntBASIC5.19□□□□□ -1.58
LDB2O43679 GSTA12P-201ENST00000402398 508 ntBASIC5.19□□□□□ -1.58
LDB2O43679 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AL356968.2-201ENST00000412769 1257 ntBASIC5.19□□□□□ -1.58
LDB2O43679 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDB2O43679 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDB2O43679 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 AL139148.1-201ENST00000427122 680 ntBASIC5.19□□□□□ -1.58
LDB2O43679 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LDB2O43679 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.19□□□□□ -1.58
LDB2O43679 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.19□□□□□ -1.58
LDB2O43679 AC245047.2-201ENST00000441060 530 ntBASIC5.19□□□□□ -1.58
LDB2O43679 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.19□□□□□ -1.58
LDB2O43679 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.19□□□□□ -1.58
LDB2O43679 RPL7P55-201ENST00000450522 746 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms