Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MTCYBP28-201ENST00000566728 1132 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 BNIP3P24-201ENST00000593398 557 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.29□□□□□ -1.56
SMAD6O43541 AC064807.4-201ENST00000607201 407 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC026422.1-201ENST00000623961 452 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SMAD6O43541 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.29□□□□□ -1.56
SMAD6O43541 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SMAD6O43541 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.28□□□□□ -1.56
SMAD6O43541 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 MIR589-201ENST00000385238 99 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 HMGB3P7-201ENST00000400214 611 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AL139039.2-201ENST00000407436 479 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 SNORA11B-201ENST00000408175 129 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 AL445528.1-201ENST00000426330 420 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 UBE2D3P3-201ENST00000426992 425 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.28□□□□□ -1.56
SMAD6O43541 HMGB3P10-201ENST00000434734 572 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.28□□□□□ -1.56
SMAD6O43541 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC078857.1-201ENST00000469870 667 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 RPL7AP6-201ENST00000477943 801 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 RPS12P31-201ENST00000491419 398 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC093890.1-201ENST00000502554 540 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC147055.3-201ENST00000510547 851 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC110775.1-201ENST00000513721 462 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC006427.1-201ENST00000514359 712 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 RN7SKP287-201ENST00000516546 266 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC022360.1-201ENST00000521058 340 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC092709.1-201ENST00000521355 1045 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC018442.3-201ENST00000523025 183 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.28□□□□□ -1.56
SMAD6O43541 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SMAD6O43541 AP002373.2-201ENST00000541631 1060 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC019322.1-201ENST00000571869 389 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC087763.1-201ENST00000603391 286 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC087468.1-201ENST00000604365 630 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC093424.1-201ENST00000604999 338 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC135178.6-201ENST00000605314 398 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC106052.1-201ENST00000608029 497 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC037198.3-201ENST00000616754 526 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC090510.2-201ENST00000617465 629 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AL078595.3-201ENST00000623815 1166 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC135068.12-201ENST00000637370 931 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 AP003399.1-201ENST00000637534 361 ntBASIC5.28□□□□□ -1.56
SMAD6O43541 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.28□□□□□ -1.56
SMAD6O43541 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SMAD6O43541 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.28□□□□□ -1.56
SMAD6O43541 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMAD6O43541 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.27□□□□□ -1.57
SMAD6O43541 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMAD6O43541 MAPK10-338ENST00000641647 3362 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.27□□□□□ -1.57
SMAD6O43541 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SMAD6O43541 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SMAD6O43541 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMAD6O43541 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMAD6O43541 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMAD6O43541 RNY3P9-201ENST00000384727 106 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SMAD6O43541 OR8V1P-201ENST00000395193 873 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.27□□□□□ -1.57
SMAD6O43541 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.27□□□□□ -1.57
SMAD6O43541 RPL7AP49-201ENST00000429522 581 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 AL591438.1-201ENST00000433508 581 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 AC016772.1-201ENST00000444170 1261 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 DNAJB5P1-201ENST00000454004 806 ntBASIC5.27□□□□□ -1.57
SMAD6O43541 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.27□□□□□ -1.57
SMAD6O43541 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.27□□□□□ -1.57
SMAD6O43541 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.27□□□□□ -1.57
SMAD6O43541 AC096992.1-201ENST00000459808 709 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms