Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
PTPN23Q9H3S7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC29.48■■■□□ 2.31
PTPN23Q9H3S7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC29.48■■■□□ 2.31
PTPN23Q9H3S7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC29.48■■■□□ 2.31
PTPN23Q9H3S7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC29.48■■■□□ 2.31
PTPN23Q9H3S7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PTPN23Q9H3S7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
PTPN23Q9H3S7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC29.47■■■□□ 2.31
PTPN23Q9H3S7 LINC01006-201ENST00000333319 2292 ntBASIC29.47■■■□□ 2.31
PTPN23Q9H3S7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
PTPN23Q9H3S7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC29.47■■■□□ 2.31
PTPN23Q9H3S7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
PTPN23Q9H3S7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 AC128688.1-201ENST00000487626 519 ntBASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
PTPN23Q9H3S7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.3
PTPN23Q9H3S7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
PTPN23Q9H3S7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC29.45■■■□□ 2.3
PTPN23Q9H3S7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC29.45■■■□□ 2.3
PTPN23Q9H3S7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
PTPN23Q9H3S7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC29.45■■■□□ 2.3
PTPN23Q9H3S7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 AC007663.1-201ENST00000438948 1240 ntBASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PTPN23Q9H3S7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PTPN23Q9H3S7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 HMGA1P5-201ENST00000412453 271 ntBASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 AL049597.2-201ENST00000565575 961 ntBASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 DUX4L26-201ENST00000489078 1255 ntBASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 CKBP1-201ENST00000565489 1086 ntBASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC29.42■■■□□ 2.3
PTPN23Q9H3S7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 KRT8P11-201ENST00000409686 1436 ntBASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 AL137013.1-201ENST00000432946 1228 ntBASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTPN23Q9H3S7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms