Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rfx6Q8C7R7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Gm37025-201ENSMUST00000195159 829 ntBASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rfx6Q8C7R7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx6Q8C7R7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx6Q8C7R7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Trmt13-210ENSMUST00000198454 880 ntBASIC17■□□□□ 0.31
Rfx6Q8C7R7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17■□□□□ 0.31
Rfx6Q8C7R7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx6Q8C7R7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx6Q8C7R7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx6Q8C7R7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx6Q8C7R7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx6Q8C7R7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx6Q8C7R7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx6Q8C7R7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms