Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AL590326.2-201ENST00000625139 305 ntBASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.69■□□□□ 0.26
RAI1Q7Z5J4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 KRT16P6-202ENST00000425692 1426 ntBASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 AL162377.1-201ENST00000618844 1793 ntBASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 CRYGFP-201ENST00000418459 633 ntBASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 Z85996.1-201ENST00000494644 937 ntBASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 EGLN1P1-201ENST00000531623 762 ntBASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAI1Q7Z5J4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 AC117947.1-201ENST00000427448 529 ntBASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 AC007663.1-201ENST00000438948 1240 ntBASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 TMEM179-206ENST00000616017 1645 ntBASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAI1Q7Z5J4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 AC004951.3-201ENST00000418645 1148 ntBASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 KRT8P8-201ENST00000434750 1448 ntBASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 MFAP1P1-201ENST00000442257 1255 ntBASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 FAM207BP-201ENST00000447172 505 ntBASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAI1Q7Z5J4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.65■□□□□ 0.26
RAI1Q7Z5J4 YBX1P2-201ENST00000489612 999 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms