Protein–RNA interactions for Protein: Q61456

Ccna1, Cyclin-A1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccna1Q61456 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Ccna1Q61456 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccna1Q61456 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccna1Q61456 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccna1Q61456 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccna1Q61456 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccna1Q61456 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccna1Q61456 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ccna1Q61456 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Gm44450-201ENSMUST00000199528 114 ntBASIC18.63■□□□□ 0.57
Ccna1Q61456 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccna1Q61456 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccna1Q61456 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccna1Q61456 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccna1Q61456 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccna1Q61456 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Gm22697-201ENSMUST00000175194 63 ntBASIC18.62■□□□□ 0.57
Ccna1Q61456 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccna1Q61456 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Haglr-201ENSMUST00000100000 2085 ntBASIC18.62■□□□□ 0.57
Ccna1Q61456 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccna1Q61456 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccna1Q61456 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccna1Q61456 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ccna1Q61456 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccna1Q61456 Gm21559-201ENSMUST00000220638 855 ntBASIC18.61■□□□□ 0.57
Ccna1Q61456 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Gm8587-201ENSMUST00000076538 843 ntBASIC18.61■□□□□ 0.57
Ccna1Q61456 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccna1Q61456 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccna1Q61456 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccna1Q61456 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.6■□□□□ 0.57
Ccna1Q61456 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Gm18101-201ENSMUST00000215769 548 ntBASIC18.6■□□□□ 0.57
Ccna1Q61456 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccna1Q61456 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccna1Q61456 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccna1Q61456 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccna1Q61456 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccna1Q61456 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccna1Q61456 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccna1Q61456 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccna1Q61456 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Ccna1Q61456 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Ccna1Q61456 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms