Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFX7Q2KHR2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.66■■□□□ 1.38
RFX7Q2KHR2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RFX7Q2KHR2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFX7Q2KHR2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFX7Q2KHR2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 AL355355.2-201ENST00000442321 338 ntBASIC23.65■■□□□ 1.38
RFX7Q2KHR2 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 KRT8P9-201ENST00000558927 1449 ntBASIC23.65■■□□□ 1.38
RFX7Q2KHR2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RFX7Q2KHR2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.64■■□□□ 1.38
RFX7Q2KHR2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 AP002982.1-201ENST00000492365 877 ntBASIC23.64■■□□□ 1.37
RFX7Q2KHR2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.64■■□□□ 1.37
RFX7Q2KHR2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RFX7Q2KHR2 SLC25A24-204ENST00000569674 2357 ntBASIC23.63■■□□□ 1.37
RFX7Q2KHR2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 KRT8P8-201ENST00000434750 1448 ntBASIC23.62■■□□□ 1.37
RFX7Q2KHR2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 KSR1P1-201ENST00000446298 240 ntBASIC23.62■■□□□ 1.37
RFX7Q2KHR2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 AC116562.2-201ENST00000507042 360 ntBASIC23.62■■□□□ 1.37
RFX7Q2KHR2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 AP000525.1-201ENST00000608286 694 ntBASIC23.62■■□□□ 1.37
RFX7Q2KHR2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.62■■□□□ 1.37
RFX7Q2KHR2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 KRT18P21-201ENST00000515767 1272 ntBASIC23.61■■□□□ 1.37
RFX7Q2KHR2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 AC010331.1-201ENST00000611423 582 ntBASIC23.61■■□□□ 1.37
RFX7Q2KHR2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RFX7Q2KHR2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RFX7Q2KHR2 KRT16P1-201ENST00000399124 1418 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms