Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.83■□□□□ 0.44
Trim72Q1XH17 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim72Q1XH17 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim72Q1XH17 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.82■□□□□ 0.44
Trim72Q1XH17 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.82■□□□□ 0.44
Trim72Q1XH17 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim72Q1XH17 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Haglr-201ENSMUST00000100000 2085 ntBASIC17.81■□□□□ 0.44
Trim72Q1XH17 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim72Q1XH17 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.8■□□□□ 0.44
Trim72Q1XH17 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.8■□□□□ 0.44
Trim72Q1XH17 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.8■□□□□ 0.44
Trim72Q1XH17 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.8■□□□□ 0.44
Trim72Q1XH17 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Phf7-203ENSMUST00000226565 1971 ntBASIC17.8■□□□□ 0.44
Trim72Q1XH17 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim72Q1XH17 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim72Q1XH17 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim72Q1XH17 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim72Q1XH17 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim72Q1XH17 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms