Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Mir6349-201ENSMUST00000184059 97 ntBASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv20A0A0B4J1H5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Gm11927-201ENSMUST00000118472 759 ntBASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Gm6576-201ENSMUST00000169678 883 ntBASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trbv20A0A0B4J1H5 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv20A0A0B4J1H5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv20A0A0B4J1H5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv20A0A0B4J1H5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms