Protein–RNA interactions for Protein: S4R185

Gm26938, Predicted gene, 26938 (Fragment), mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm26938S4R185 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm26938S4R185 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm26938S4R185 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm26938S4R185 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm26938S4R185 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gm26938S4R185 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm26938S4R185 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm26938S4R185 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm26938S4R185 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm26938S4R185 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm26938S4R185 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm26938S4R185 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm26938S4R185 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.28■□□□□ 0.36
Gm26938S4R185 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm26938S4R185 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm26938S4R185 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm26938S4R185 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm26938S4R185 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm26938S4R185 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
Gm26938S4R185 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm26938S4R185 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm26938S4R185 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm26938S4R185 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm26938S4R185 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm26938S4R185 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm26938S4R185 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm26938S4R185 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm26938S4R185 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm26938S4R185 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm26938S4R185 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm26938S4R185 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm26938S4R185 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm26938S4R185 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm26938S4R185 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm26938S4R185 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm26938S4R185 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm26938S4R185 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm26938S4R185 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm26938S4R185 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm26938S4R185 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm26938S4R185 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm26938S4R185 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm26938S4R185 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm26938S4R185 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm26938S4R185 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm26938S4R185 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm26938S4R185 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm26938S4R185 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm26938S4R185 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Gm26938S4R185 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm26938S4R185 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm26938S4R185 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gm26938S4R185 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm26938S4R185 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm26938S4R185 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm26938S4R185 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm26938S4R185 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm26938S4R185 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm26938S4R185 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Gm26938S4R185 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm26938S4R185 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm26938S4R185 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm26938S4R185 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm26938S4R185 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm26938S4R185 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm26938S4R185 Gm8109-201ENSMUST00000194076 746 ntBASIC17.16■□□□□ 0.34
Gm26938S4R185 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm26938S4R185 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm26938S4R185 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm26938S4R185 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm26938S4R185 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm26938S4R185 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Gm26938S4R185 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm26938S4R185 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm26938S4R185 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm26938S4R185 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm26938S4R185 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm26938S4R185 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm26938S4R185 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm26938S4R185 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm26938S4R185 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm26938S4R185 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm26938S4R185 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm26938S4R185 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm26938S4R185 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm26938S4R185 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm26938S4R185 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm26938S4R185 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm26938S4R185 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm26938S4R185 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm26938S4R185 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm26938S4R185 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.11■□□□□ 0.33
Gm26938S4R185 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm26938S4R185 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm26938S4R185 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm26938S4R185 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm26938S4R185 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm26938S4R185 Gm16148-201ENSMUST00000119653 893 ntBASIC17.1■□□□□ 0.33
Gm26938S4R185 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm26938S4R185 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 171.4 ms