Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Atp6v1c1Q9Z1G3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Atp6v1c1Q9Z1G3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Atp6v1c1Q9Z1G3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Atp6v1c1Q9Z1G3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Atp6v1c1Q9Z1G3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Atp6v1c1Q9Z1G3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Atp6v1c1Q9Z1G3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Atp6v1c1Q9Z1G3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Atp6v1c1Q9Z1G3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Atp6v1c1Q9Z1G3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.86■■□□□ 1.25
Atp6v1c1Q9Z1G3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Atp6v1c1Q9Z1G3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Atp6v1c1Q9Z1G3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Atp6v1c1Q9Z1G3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Atp6v1c1Q9Z1G3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Atp6v1c1Q9Z1G3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Atp6v1c1Q9Z1G3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Atp6v1c1Q9Z1G3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Atp6v1c1Q9Z1G3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Atp6v1c1Q9Z1G3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Atp6v1c1Q9Z1G3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Atp6v1c1Q9Z1G3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Atp6v1c1Q9Z1G3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Atp6v1c1Q9Z1G3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Atp6v1c1Q9Z1G3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
Atp6v1c1Q9Z1G3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Atp6v1c1Q9Z1G3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Atp6v1c1Q9Z1G3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Atp6v1c1Q9Z1G3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Atp6v1c1Q9Z1G3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Atp6v1c1Q9Z1G3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Atp6v1c1Q9Z1G3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Atp6v1c1Q9Z1G3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Atp6v1c1Q9Z1G3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Atp6v1c1Q9Z1G3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Atp6v1c1Q9Z1G3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1c1Q9Z1G3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Atp6v1c1Q9Z1G3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atp6v1c1Q9Z1G3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.23
Atp6v1c1Q9Z1G3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Atp6v1c1Q9Z1G3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1c1Q9Z1G3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1c1Q9Z1G3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atp6v1c1Q9Z1G3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atp6v1c1Q9Z1G3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.74■■□□□ 1.23
Atp6v1c1Q9Z1G3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atp6v1c1Q9Z1G3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atp6v1c1Q9Z1G3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atp6v1c1Q9Z1G3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atp6v1c1Q9Z1G3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atp6v1c1Q9Z1G3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1c1Q9Z1G3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1c1Q9Z1G3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1c1Q9Z1G3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1c1Q9Z1G3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atp6v1c1Q9Z1G3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atp6v1c1Q9Z1G3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1c1Q9Z1G3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atp6v1c1Q9Z1G3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.69■■□□□ 1.22
Atp6v1c1Q9Z1G3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atp6v1c1Q9Z1G3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atp6v1c1Q9Z1G3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Atp6v1c1Q9Z1G3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atp6v1c1Q9Z1G3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.68■■□□□ 1.22
Atp6v1c1Q9Z1G3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atp6v1c1Q9Z1G3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atp6v1c1Q9Z1G3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atp6v1c1Q9Z1G3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Atp6v1c1Q9Z1G3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Atp6v1c1Q9Z1G3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Atp6v1c1Q9Z1G3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atp6v1c1Q9Z1G3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atp6v1c1Q9Z1G3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Atp6v1c1Q9Z1G3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.65■■□□□ 1.22
Atp6v1c1Q9Z1G3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atp6v1c1Q9Z1G3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atp6v1c1Q9Z1G3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms