Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcsQ9WU84 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CcsQ9WU84 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcsQ9WU84 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CcsQ9WU84 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CcsQ9WU84 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CcsQ9WU84 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CcsQ9WU84 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CcsQ9WU84 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcsQ9WU84 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcsQ9WU84 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CcsQ9WU84 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.95■□□□□ 0.46
CcsQ9WU84 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CcsQ9WU84 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.94■□□□□ 0.46
CcsQ9WU84 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.94■□□□□ 0.46
CcsQ9WU84 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CcsQ9WU84 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcsQ9WU84 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcsQ9WU84 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcsQ9WU84 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CcsQ9WU84 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CcsQ9WU84 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CcsQ9WU84 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CcsQ9WU84 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CcsQ9WU84 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CcsQ9WU84 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CcsQ9WU84 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CcsQ9WU84 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CcsQ9WU84 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CcsQ9WU84 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CcsQ9WU84 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CcsQ9WU84 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CcsQ9WU84 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.89■□□□□ 0.45
CcsQ9WU84 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CcsQ9WU84 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CcsQ9WU84 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CcsQ9WU84 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CcsQ9WU84 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CcsQ9WU84 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CcsQ9WU84 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CcsQ9WU84 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CcsQ9WU84 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CcsQ9WU84 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CcsQ9WU84 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CcsQ9WU84 Gm9397-201ENSMUST00000200125 605 ntBASIC17.86■□□□□ 0.45
CcsQ9WU84 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CcsQ9WU84 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CcsQ9WU84 Gm45855-201ENSMUST00000212546 880 ntBASIC17.85■□□□□ 0.45
CcsQ9WU84 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CcsQ9WU84 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CcsQ9WU84 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CcsQ9WU84 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CcsQ9WU84 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.84■□□□□ 0.45
CcsQ9WU84 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CcsQ9WU84 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CcsQ9WU84 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CcsQ9WU84 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CcsQ9WU84 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CcsQ9WU84 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CcsQ9WU84 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CcsQ9WU84 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
CcsQ9WU84 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CcsQ9WU84 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CcsQ9WU84 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CcsQ9WU84 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CcsQ9WU84 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CcsQ9WU84 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CcsQ9WU84 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.82■□□□□ 0.44
CcsQ9WU84 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CcsQ9WU84 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CcsQ9WU84 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CcsQ9WU84 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CcsQ9WU84 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CcsQ9WU84 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CcsQ9WU84 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.81■□□□□ 0.44
CcsQ9WU84 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.81■□□□□ 0.44
CcsQ9WU84 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CcsQ9WU84 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.81■□□□□ 0.44
CcsQ9WU84 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CcsQ9WU84 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CcsQ9WU84 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CcsQ9WU84 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CcsQ9WU84 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CcsQ9WU84 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.79■□□□□ 0.44
CcsQ9WU84 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CcsQ9WU84 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CcsQ9WU84 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CcsQ9WU84 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.78■□□□□ 0.44
CcsQ9WU84 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CcsQ9WU84 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CcsQ9WU84 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CcsQ9WU84 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CcsQ9WU84 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CcsQ9WU84 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms