Protein–RNA interactions for Protein: Q9R0G7

Zeb2, Zinc finger E-box-binding homeobox 2, mousemouse

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zeb2Q9R0G7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Zeb2Q9R0G7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Zeb2Q9R0G7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Zeb2Q9R0G7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Zeb2Q9R0G7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Zeb2Q9R0G7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Zeb2Q9R0G7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Zeb2Q9R0G7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
Zeb2Q9R0G7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Zeb2Q9R0G7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Zeb2Q9R0G7 Gm45364-201ENSMUST00000210883 159 ntBASIC31.46■■■□□ 2.63
Zeb2Q9R0G7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Zeb2Q9R0G7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Zeb2Q9R0G7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Zeb2Q9R0G7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Zeb2Q9R0G7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Zeb2Q9R0G7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Zeb2Q9R0G7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Zeb2Q9R0G7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Zeb2Q9R0G7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Zeb2Q9R0G7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Zeb2Q9R0G7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.41■■■□□ 2.62
Zeb2Q9R0G7 Gm27502-201ENSMUST00000183495 199 ntBASIC31.41■■■□□ 2.62
Zeb2Q9R0G7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Zeb2Q9R0G7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.4■■■□□ 2.62
Zeb2Q9R0G7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Zeb2Q9R0G7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Zeb2Q9R0G7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Zeb2Q9R0G7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Zeb2Q9R0G7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Zeb2Q9R0G7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Zeb2Q9R0G7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Zeb2Q9R0G7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Zeb2Q9R0G7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Zeb2Q9R0G7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Zeb2Q9R0G7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.34■■■□□ 2.61
Zeb2Q9R0G7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Zeb2Q9R0G7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Zeb2Q9R0G7 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.33■■■□□ 2.61
Zeb2Q9R0G7 Gm37136-201ENSMUST00000194368 194 ntBASIC31.33■■■□□ 2.61
Zeb2Q9R0G7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Zeb2Q9R0G7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.32■■■□□ 2.6
Zeb2Q9R0G7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.31■■■□□ 2.6
Zeb2Q9R0G7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Zeb2Q9R0G7 Gm14523-201ENSMUST00000117260 558 ntBASIC31.3■■■□□ 2.6
Zeb2Q9R0G7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Zeb2Q9R0G7 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.29■■■□□ 2.6
Zeb2Q9R0G7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Zeb2Q9R0G7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Zeb2Q9R0G7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.28■■■□□ 2.6
Zeb2Q9R0G7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC31.27■■■□□ 2.6
Zeb2Q9R0G7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Zeb2Q9R0G7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.26■■■□□ 2.59
Zeb2Q9R0G7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Zeb2Q9R0G7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Zeb2Q9R0G7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zeb2Q9R0G7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zeb2Q9R0G7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Zeb2Q9R0G7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Zeb2Q9R0G7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.24■■■□□ 2.59
Zeb2Q9R0G7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.23■■■□□ 2.59
Zeb2Q9R0G7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Zeb2Q9R0G7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.21■■■□□ 2.59
Zeb2Q9R0G7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Zeb2Q9R0G7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Zeb2Q9R0G7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.2■■■□□ 2.59
Zeb2Q9R0G7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Zeb2Q9R0G7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Zeb2Q9R0G7 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.19■■■□□ 2.58
Zeb2Q9R0G7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Zeb2Q9R0G7 Gm15039-201ENSMUST00000118914 875 ntBASIC31.19■■■□□ 2.58
Zeb2Q9R0G7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Zeb2Q9R0G7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Zeb2Q9R0G7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Zeb2Q9R0G7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.17■■■□□ 2.58
Zeb2Q9R0G7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Zeb2Q9R0G7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.17■■■□□ 2.58
Zeb2Q9R0G7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Zeb2Q9R0G7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Zeb2Q9R0G7 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.15■■■□□ 2.58
Zeb2Q9R0G7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Zeb2Q9R0G7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
Zeb2Q9R0G7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Zeb2Q9R0G7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Zeb2Q9R0G7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.13■■■□□ 2.57
Zeb2Q9R0G7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC31.11■■■□□ 2.57
Zeb2Q9R0G7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Zeb2Q9R0G7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Zeb2Q9R0G7 Gm5812-201ENSMUST00000061073 957 ntBASIC31.09■■■□□ 2.57
Zeb2Q9R0G7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.09■■■□□ 2.57
Zeb2Q9R0G7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Zeb2Q9R0G7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.57
Zeb2Q9R0G7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Zeb2Q9R0G7 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.07■■■□□ 2.56
Zeb2Q9R0G7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Zeb2Q9R0G7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Zeb2Q9R0G7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Zeb2Q9R0G7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Zeb2Q9R0G7 Gm9812-201ENSMUST00000061934 968 ntBASIC31.04■■■□□ 2.56
Zeb2Q9R0G7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms