Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Prg4Q9JM99 Amer2-203ENSMUST00000225247 2662 ntBASIC21.76■■□□□ 1.07
Prg4Q9JM99 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prg4Q9JM99 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prg4Q9JM99 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Prg4Q9JM99 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prg4Q9JM99 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prg4Q9JM99 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prg4Q9JM99 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prg4Q9JM99 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prg4Q9JM99 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prg4Q9JM99 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prg4Q9JM99 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prg4Q9JM99 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.72■■□□□ 1.07
Prg4Q9JM99 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.72■■□□□ 1.07
Prg4Q9JM99 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Prg4Q9JM99 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.69■■□□□ 1.06
Prg4Q9JM99 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prg4Q9JM99 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Prg4Q9JM99 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.68■■□□□ 1.06
Prg4Q9JM99 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prg4Q9JM99 Gm37136-201ENSMUST00000194368 194 ntBASIC21.67■■□□□ 1.06
Prg4Q9JM99 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prg4Q9JM99 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Prg4Q9JM99 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Prg4Q9JM99 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.64■■□□□ 1.05
Prg4Q9JM99 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Prg4Q9JM99 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prg4Q9JM99 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prg4Q9JM99 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Prg4Q9JM99 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prg4Q9JM99 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Prg4Q9JM99 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prg4Q9JM99 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.59■■□□□ 1.05
Prg4Q9JM99 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prg4Q9JM99 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.58■■□□□ 1.05
Prg4Q9JM99 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prg4Q9JM99 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prg4Q9JM99 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prg4Q9JM99 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prg4Q9JM99 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prg4Q9JM99 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prg4Q9JM99 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.56■■□□□ 1.04
Prg4Q9JM99 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.54■■□□□ 1.04
Prg4Q9JM99 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.54■■□□□ 1.04
Prg4Q9JM99 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.54■■□□□ 1.04
Prg4Q9JM99 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prg4Q9JM99 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prg4Q9JM99 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Prg4Q9JM99 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prg4Q9JM99 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prg4Q9JM99 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prg4Q9JM99 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prg4Q9JM99 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.51■■□□□ 1.03
Prg4Q9JM99 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.51■■□□□ 1.03
Prg4Q9JM99 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prg4Q9JM99 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prg4Q9JM99 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prg4Q9JM99 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.49■■□□□ 1.03
Prg4Q9JM99 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Prg4Q9JM99 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prg4Q9JM99 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Prg4Q9JM99 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prg4Q9JM99 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Prg4Q9JM99 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prg4Q9JM99 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prg4Q9JM99 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.47■■□□□ 1.03
Prg4Q9JM99 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.47■■□□□ 1.03
Prg4Q9JM99 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Prg4Q9JM99 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Prg4Q9JM99 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.46■■□□□ 1.03
Prg4Q9JM99 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.46■■□□□ 1.03
Prg4Q9JM99 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Prg4Q9JM99 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prg4Q9JM99 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prg4Q9JM99 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.44■■□□□ 1.02
Prg4Q9JM99 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.44■■□□□ 1.02
Prg4Q9JM99 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prg4Q9JM99 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prg4Q9JM99 Gm4799-201ENSMUST00000095396 657 ntBASIC21.42■■□□□ 1.02
Prg4Q9JM99 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prg4Q9JM99 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.41■■□□□ 1.02
Prg4Q9JM99 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Prg4Q9JM99 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.41■■□□□ 1.02
Prg4Q9JM99 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.41■■□□□ 1.02
Prg4Q9JM99 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prg4Q9JM99 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Prg4Q9JM99 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prg4Q9JM99 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.4■■□□□ 1.02
Prg4Q9JM99 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.39■■□□□ 1.02
Prg4Q9JM99 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Prg4Q9JM99 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.39■■□□□ 1.01
Prg4Q9JM99 Mir3960-201ENSMUST00000198213 73 ntBASIC21.38■■□□□ 1.01
Prg4Q9JM99 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prg4Q9JM99 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prg4Q9JM99 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Prg4Q9JM99 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Prg4Q9JM99 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.37■■□□□ 1.01
Prg4Q9JM99 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.37■■□□□ 1.01
Prg4Q9JM99 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms