Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.13■■□□□ 1.61
Scn5aQ9JJV9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Gm12366-201ENSMUST00000121722 873 ntBASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Gm5786-201ENSMUST00000085368 882 ntBASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn5aQ9JJV9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.11■■□□□ 1.61
Scn5aQ9JJV9 Gm11687-201ENSMUST00000118911 886 ntBASIC25.11■■□□□ 1.61
Scn5aQ9JJV9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.11■■□□□ 1.61
Scn5aQ9JJV9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn5aQ9JJV9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn5aQ9JJV9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn5aQ9JJV9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Scn5aQ9JJV9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn5aQ9JJV9 Gm16437-201ENSMUST00000025669 507 ntBASIC25.09■■□□□ 1.61
Scn5aQ9JJV9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.09■■□□□ 1.61
Scn5aQ9JJV9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Scn5aQ9JJV9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scn5aQ9JJV9 Gm4799-201ENSMUST00000095396 657 ntBASIC25.08■■□□□ 1.61
Scn5aQ9JJV9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scn5aQ9JJV9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.08■■□□□ 1.61
Scn5aQ9JJV9 Gm9806-201ENSMUST00000051080 552 ntBASIC25.08■■□□□ 1.61
Scn5aQ9JJV9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn5aQ9JJV9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn5aQ9JJV9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Scn5aQ9JJV9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.07■■□□□ 1.6
Scn5aQ9JJV9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn5aQ9JJV9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Scn5aQ9JJV9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn5aQ9JJV9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn5aQ9JJV9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn5aQ9JJV9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Scn5aQ9JJV9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.03■■□□□ 1.6
Scn5aQ9JJV9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn5aQ9JJV9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn5aQ9JJV9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.02■■□□□ 1.6
Scn5aQ9JJV9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Scn5aQ9JJV9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scn5aQ9JJV9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.01■■□□□ 1.59
Scn5aQ9JJV9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.01■■□□□ 1.59
Scn5aQ9JJV9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scn5aQ9JJV9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Scn5aQ9JJV9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn5aQ9JJV9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25■■□□□ 1.59
Scn5aQ9JJV9 Mir3960-201ENSMUST00000198213 73 ntBASIC24.98■■□□□ 1.59
Scn5aQ9JJV9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Scn5aQ9JJV9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Scn5aQ9JJV9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scn5aQ9JJV9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.98■■□□□ 1.59
Scn5aQ9JJV9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Scn5aQ9JJV9 Gm37136-201ENSMUST00000194368 194 ntBASIC24.96■■□□□ 1.59
Scn5aQ9JJV9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scn5aQ9JJV9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scn5aQ9JJV9 Gm27502-201ENSMUST00000183495 199 ntBASIC24.96■■□□□ 1.59
Scn5aQ9JJV9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scn5aQ9JJV9 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.95■■□□□ 1.59
Scn5aQ9JJV9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.95■■□□□ 1.58
Scn5aQ9JJV9 Gm7332-201ENSMUST00000118351 454 ntBASIC24.94■■□□□ 1.58
Scn5aQ9JJV9 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.93■■□□□ 1.58
Scn5aQ9JJV9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scn5aQ9JJV9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Scn5aQ9JJV9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Scn5aQ9JJV9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Scn5aQ9JJV9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Scn5aQ9JJV9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Scn5aQ9JJV9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Scn5aQ9JJV9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Scn5aQ9JJV9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scn5aQ9JJV9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.88■■□□□ 1.57
Scn5aQ9JJV9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Scn5aQ9JJV9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Scn5aQ9JJV9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scn5aQ9JJV9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Scn5aQ9JJV9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Scn5aQ9JJV9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.57
Scn5aQ9JJV9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Scn5aQ9JJV9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scn5aQ9JJV9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scn5aQ9JJV9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scn5aQ9JJV9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
Scn5aQ9JJV9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn5aQ9JJV9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn5aQ9JJV9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.79■■□□□ 1.56
Scn5aQ9JJV9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms