Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rbfox1Q9JJ43 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.02■□□□□ 0.8
Rbfox1Q9JJ43 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rbfox1Q9JJ43 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rbfox1Q9JJ43 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rbfox1Q9JJ43 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rbfox1Q9JJ43 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rbfox1Q9JJ43 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.97■□□□□ 0.79
Rbfox1Q9JJ43 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.96■□□□□ 0.79
Rbfox1Q9JJ43 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rbfox1Q9JJ43 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rbfox1Q9JJ43 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rbfox1Q9JJ43 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbfox1Q9JJ43 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbfox1Q9JJ43 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Particl-201ENSMUST00000205370 1560 ntBASIC19.9■□□□□ 0.78
Rbfox1Q9JJ43 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbfox1Q9JJ43 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rbfox1Q9JJ43 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rbfox1Q9JJ43 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Rbfox1Q9JJ43 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rbfox1Q9JJ43 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rbfox1Q9JJ43 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Rbfox1Q9JJ43 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.84■□□□□ 0.77
Rbfox1Q9JJ43 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbfox1Q9JJ43 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbfox1Q9JJ43 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbfox1Q9JJ43 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rbfox1Q9JJ43 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rbfox1Q9JJ43 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rbfox1Q9JJ43 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rbfox1Q9JJ43 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rbfox1Q9JJ43 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Gm45855-201ENSMUST00000212546 880 ntBASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rbfox1Q9JJ43 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbfox1Q9JJ43 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rbfox1Q9JJ43 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rbfox1Q9JJ43 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rbfox1Q9JJ43 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rbfox1Q9JJ43 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rbfox1Q9JJ43 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms