Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.53■■□□□ 1.36
Vps35Q9EQH3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps35Q9EQH3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.53■■□□□ 1.36
Vps35Q9EQH3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Vps35Q9EQH3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Vps35Q9EQH3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Vps35Q9EQH3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.51■■□□□ 1.35
Vps35Q9EQH3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Vps35Q9EQH3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vps35Q9EQH3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Vps35Q9EQH3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps35Q9EQH3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps35Q9EQH3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Vps35Q9EQH3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps35Q9EQH3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.48■■□□□ 1.35
Vps35Q9EQH3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps35Q9EQH3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vps35Q9EQH3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vps35Q9EQH3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.46■■□□□ 1.35
Vps35Q9EQH3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.46■■□□□ 1.35
Vps35Q9EQH3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps35Q9EQH3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps35Q9EQH3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Vps35Q9EQH3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
Vps35Q9EQH3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Vps35Q9EQH3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.45■■□□□ 1.34
Vps35Q9EQH3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Vps35Q9EQH3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.45■■□□□ 1.34
Vps35Q9EQH3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Vps35Q9EQH3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Vps35Q9EQH3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Vps35Q9EQH3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vps35Q9EQH3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vps35Q9EQH3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vps35Q9EQH3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vps35Q9EQH3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Vps35Q9EQH3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Vps35Q9EQH3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.38■■□□□ 1.33
Vps35Q9EQH3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Vps35Q9EQH3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
Vps35Q9EQH3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.36■■□□□ 1.33
Vps35Q9EQH3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Vps35Q9EQH3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Vps35Q9EQH3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vps35Q9EQH3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vps35Q9EQH3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vps35Q9EQH3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Vps35Q9EQH3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Vps35Q9EQH3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.35■■□□□ 1.33
Vps35Q9EQH3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vps35Q9EQH3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Vps35Q9EQH3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Vps35Q9EQH3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vps35Q9EQH3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Vps35Q9EQH3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Vps35Q9EQH3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.31■■□□□ 1.32
Vps35Q9EQH3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.31■■□□□ 1.32
Vps35Q9EQH3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Vps35Q9EQH3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.29■■□□□ 1.32
Vps35Q9EQH3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Vps35Q9EQH3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vps35Q9EQH3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vps35Q9EQH3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vps35Q9EQH3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vps35Q9EQH3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vps35Q9EQH3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Vps35Q9EQH3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Vps35Q9EQH3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vps35Q9EQH3 Gm7432-201ENSMUST00000210343 879 ntBASIC23.27■■□□□ 1.32
Vps35Q9EQH3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Vps35Q9EQH3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Vps35Q9EQH3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Vps35Q9EQH3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.31
Vps35Q9EQH3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.31
Vps35Q9EQH3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Vps35Q9EQH3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vps35Q9EQH3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Vps35Q9EQH3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Vps35Q9EQH3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Vps35Q9EQH3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vps35Q9EQH3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
Vps35Q9EQH3 Particl-201ENSMUST00000205370 1560 ntBASIC23.25■■□□□ 1.31
Vps35Q9EQH3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vps35Q9EQH3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.24■■□□□ 1.31
Vps35Q9EQH3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.23■■□□□ 1.31
Vps35Q9EQH3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Vps35Q9EQH3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms