Protein–RNA interactions for Protein: Q9DCK3

Tspan4, Tetraspanin-4, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan4Q9DCK3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Tspan4Q9DCK3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tspan4Q9DCK3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tspan4Q9DCK3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tspan4Q9DCK3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tspan4Q9DCK3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.54■□□□□ 0.72
Tspan4Q9DCK3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tspan4Q9DCK3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tspan4Q9DCK3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.52■□□□□ 0.72
Tspan4Q9DCK3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tspan4Q9DCK3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tspan4Q9DCK3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tspan4Q9DCK3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tspan4Q9DCK3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tspan4Q9DCK3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tspan4Q9DCK3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan4Q9DCK3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan4Q9DCK3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan4Q9DCK3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tspan4Q9DCK3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.49■□□□□ 0.71
Tspan4Q9DCK3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Tspan4Q9DCK3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan4Q9DCK3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tspan4Q9DCK3 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.48■□□□□ 0.71
Tspan4Q9DCK3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan4Q9DCK3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tspan4Q9DCK3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tspan4Q9DCK3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tspan4Q9DCK3 Zfp131-205ENSMUST00000223812 663 ntBASIC19.47■□□□□ 0.71
Tspan4Q9DCK3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan4Q9DCK3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan4Q9DCK3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tspan4Q9DCK3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan4Q9DCK3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tspan4Q9DCK3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Tspan4Q9DCK3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tspan4Q9DCK3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Tspan4Q9DCK3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tspan4Q9DCK3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan4Q9DCK3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan4Q9DCK3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tspan4Q9DCK3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan4Q9DCK3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tspan4Q9DCK3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Tspan4Q9DCK3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.43■□□□□ 0.7
Tspan4Q9DCK3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan4Q9DCK3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tspan4Q9DCK3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tspan4Q9DCK3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tspan4Q9DCK3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tspan4Q9DCK3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan4Q9DCK3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tspan4Q9DCK3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tspan4Q9DCK3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tspan4Q9DCK3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.39■□□□□ 0.69
Tspan4Q9DCK3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tspan4Q9DCK3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tspan4Q9DCK3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tspan4Q9DCK3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tspan4Q9DCK3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tspan4Q9DCK3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tspan4Q9DCK3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tspan4Q9DCK3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tspan4Q9DCK3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tspan4Q9DCK3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tspan4Q9DCK3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tspan4Q9DCK3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tspan4Q9DCK3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tspan4Q9DCK3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tspan4Q9DCK3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Tspan4Q9DCK3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tspan4Q9DCK3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tspan4Q9DCK3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tspan4Q9DCK3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.35■□□□□ 0.69
Tspan4Q9DCK3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tspan4Q9DCK3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tspan4Q9DCK3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tspan4Q9DCK3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tspan4Q9DCK3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tspan4Q9DCK3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tspan4Q9DCK3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tspan4Q9DCK3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tspan4Q9DCK3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tspan4Q9DCK3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tspan4Q9DCK3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tspan4Q9DCK3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 1423.4 ms