Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hcfc2Q9D968 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hcfc2Q9D968 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.77■□□□□ 0.43
Hcfc2Q9D968 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Hcfc2Q9D968 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hcfc2Q9D968 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hcfc2Q9D968 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hcfc2Q9D968 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hcfc2Q9D968 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hcfc2Q9D968 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.75■□□□□ 0.43
Hcfc2Q9D968 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcfc2Q9D968 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.75■□□□□ 0.43
Hcfc2Q9D968 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hcfc2Q9D968 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Hcfc2Q9D968 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hcfc2Q9D968 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcfc2Q9D968 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcfc2Q9D968 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.74■□□□□ 0.43
Hcfc2Q9D968 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hcfc2Q9D968 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.73■□□□□ 0.43
Hcfc2Q9D968 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hcfc2Q9D968 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.73■□□□□ 0.43
Hcfc2Q9D968 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hcfc2Q9D968 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hcfc2Q9D968 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcfc2Q9D968 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcfc2Q9D968 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcfc2Q9D968 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcfc2Q9D968 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hcfc2Q9D968 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcfc2Q9D968 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcfc2Q9D968 Gm16148-201ENSMUST00000119653 893 ntBASIC17.69■□□□□ 0.42
Hcfc2Q9D968 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcfc2Q9D968 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hcfc2Q9D968 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc2Q9D968 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc2Q9D968 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc2Q9D968 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Gm24804-201ENSMUST00000174982 85 ntBASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc2Q9D968 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc2Q9D968 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc2Q9D968 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc2Q9D968 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc2Q9D968 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc2Q9D968 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc2Q9D968 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.62■□□□□ 0.41
Hcfc2Q9D968 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hcfc2Q9D968 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hcfc2Q9D968 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc2Q9D968 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc2Q9D968 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc2Q9D968 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc2Q9D968 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc2Q9D968 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc2Q9D968 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc2Q9D968 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc2Q9D968 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc2Q9D968 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc2Q9D968 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc2Q9D968 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc2Q9D968 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hcfc2Q9D968 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc2Q9D968 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hcfc2Q9D968 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc2Q9D968 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hcfc2Q9D968 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc2Q9D968 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc2Q9D968 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hcfc2Q9D968 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms