Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk3bl1Q9D701 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Upk3bl1Q9D701 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upk3bl1Q9D701 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Upk3bl1Q9D701 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk3bl1Q9D701 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upk3bl1Q9D701 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Upk3bl1Q9D701 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.33■■□□□ 1
Upk3bl1Q9D701 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk3bl1Q9D701 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Peli2-204ENSMUST00000226513 1320 ntBASIC21.31■■□□□ 1
Upk3bl1Q9D701 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk3bl1Q9D701 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Upk3bl1Q9D701 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upk3bl1Q9D701 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upk3bl1Q9D701 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upk3bl1Q9D701 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Upk3bl1Q9D701 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Upk3bl1Q9D701 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Upk3bl1Q9D701 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Upk3bl1Q9D701 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.27■■□□□ 1
Upk3bl1Q9D701 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Upk3bl1Q9D701 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.27■■□□□ 1
Upk3bl1Q9D701 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Upk3bl1Q9D701 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Upk3bl1Q9D701 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Upk3bl1Q9D701 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Upk3bl1Q9D701 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Upk3bl1Q9D701 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.21■□□□□ 0.99
Upk3bl1Q9D701 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Upk3bl1Q9D701 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Upk3bl1Q9D701 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Upk3bl1Q9D701 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk3bl1Q9D701 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Upk3bl1Q9D701 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Upk3bl1Q9D701 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms