Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Gm8503-201ENSMUST00000118131 455 ntBASIC23.55■■□□□ 1.36
Snrnp48Q9D361 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Snrnp48Q9D361 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Snrnp48Q9D361 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Snrnp48Q9D361 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Snrnp48Q9D361 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.53■■□□□ 1.36
Snrnp48Q9D361 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
Snrnp48Q9D361 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Snrnp48Q9D361 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Snrnp48Q9D361 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Snrnp48Q9D361 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.52■■□□□ 1.36
Snrnp48Q9D361 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Snrnp48Q9D361 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Snrnp48Q9D361 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Snrnp48Q9D361 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Snrnp48Q9D361 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Snrnp48Q9D361 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.5■■□□□ 1.35
Snrnp48Q9D361 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Snrnp48Q9D361 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Snrnp48Q9D361 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Snrnp48Q9D361 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Snrnp48Q9D361 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp48Q9D361 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.48■■□□□ 1.35
Snrnp48Q9D361 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.48■■□□□ 1.35
Snrnp48Q9D361 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp48Q9D361 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Snrnp48Q9D361 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp48Q9D361 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Snrnp48Q9D361 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.47■■□□□ 1.35
Snrnp48Q9D361 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.47■■□□□ 1.35
Snrnp48Q9D361 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp48Q9D361 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Snrnp48Q9D361 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.46■■□□□ 1.35
Snrnp48Q9D361 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Snrnp48Q9D361 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.44■■□□□ 1.34
Snrnp48Q9D361 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Snrnp48Q9D361 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Snrnp48Q9D361 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.42■■□□□ 1.34
Snrnp48Q9D361 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Snrnp48Q9D361 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp48Q9D361 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.41■■□□□ 1.34
Snrnp48Q9D361 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Snrnp48Q9D361 Particl-201ENSMUST00000205370 1560 ntBASIC23.4■■□□□ 1.34
Snrnp48Q9D361 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Snrnp48Q9D361 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Snrnp48Q9D361 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Snrnp48Q9D361 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Snrnp48Q9D361 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Snrnp48Q9D361 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Snrnp48Q9D361 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Snrnp48Q9D361 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.39■■□□□ 1.33
Snrnp48Q9D361 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Snrnp48Q9D361 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Snrnp48Q9D361 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Snrnp48Q9D361 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Snrnp48Q9D361 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Snrnp48Q9D361 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.36■■□□□ 1.33
Snrnp48Q9D361 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Snrnp48Q9D361 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Snrnp48Q9D361 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Snrnp48Q9D361 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.34■■□□□ 1.33
Snrnp48Q9D361 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Snrnp48Q9D361 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Snrnp48Q9D361 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Snrnp48Q9D361 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Snrnp48Q9D361 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Snrnp48Q9D361 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Snrnp48Q9D361 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Snrnp48Q9D361 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Snrnp48Q9D361 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
Snrnp48Q9D361 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Snrnp48Q9D361 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Snrnp48Q9D361 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Snrnp48Q9D361 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Snrnp48Q9D361 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Snrnp48Q9D361 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Snrnp48Q9D361 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Snrnp48Q9D361 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Snrnp48Q9D361 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Snrnp48Q9D361 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.24■■□□□ 1.31
Snrnp48Q9D361 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snrnp48Q9D361 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snrnp48Q9D361 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Snrnp48Q9D361 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Snrnp48Q9D361 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms