Protein–RNA interactions for Protein: Q9D1C9

Rrp7a, Ribosomal RNA-processing protein 7 homolog A, mousemouse

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp7aQ9D1C9 Gm11687-201ENSMUST00000118911 886 ntBASIC35.35■■■■□ 3.25
Rrp7aQ9D1C9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
Rrp7aQ9D1C9 Gm16437-201ENSMUST00000025669 507 ntBASIC35.34■■■■□ 3.25
Rrp7aQ9D1C9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Rrp7aQ9D1C9 Gm4799-201ENSMUST00000095396 657 ntBASIC35.33■■■■□ 3.25
Rrp7aQ9D1C9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Gm12366-201ENSMUST00000121722 873 ntBASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Gm5786-201ENSMUST00000085368 882 ntBASIC35.32■■■■□ 3.24
Rrp7aQ9D1C9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Rrp7aQ9D1C9 Pkd1-207ENSMUST00000228550 1050 ntBASIC35.31■■■■□ 3.24
Rrp7aQ9D1C9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Rrp7aQ9D1C9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Rrp7aQ9D1C9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Rrp7aQ9D1C9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Rrp7aQ9D1C9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC35.27■■■■□ 3.24
Rrp7aQ9D1C9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Rrp7aQ9D1C9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC35.27■■■■□ 3.24
Rrp7aQ9D1C9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC35.26■■■■□ 3.24
Rrp7aQ9D1C9 Mir3960-201ENSMUST00000198213 73 ntBASIC35.26■■■■□ 3.24
Rrp7aQ9D1C9 AC154454.1-201ENSMUST00000225253 216 ntBASIC35.26■■■■□ 3.24
Rrp7aQ9D1C9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
Rrp7aQ9D1C9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Rrp7aQ9D1C9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC35.25■■■■□ 3.23
Rrp7aQ9D1C9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Rrp7aQ9D1C9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC35.24■■■■□ 3.23
Rrp7aQ9D1C9 Gm45364-201ENSMUST00000210883 159 ntBASIC35.24■■■■□ 3.23
Rrp7aQ9D1C9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC35.23■■■■□ 3.23
Rrp7aQ9D1C9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC35.23■■■■□ 3.23
Rrp7aQ9D1C9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
Rrp7aQ9D1C9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Rrp7aQ9D1C9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Rrp7aQ9D1C9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Rrp7aQ9D1C9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rrp7aQ9D1C9 Gm9905-201ENSMUST00000065740 1845 ntBASIC35.2■■■■□ 3.23
Rrp7aQ9D1C9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Rrp7aQ9D1C9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Rrp7aQ9D1C9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Rrp7aQ9D1C9 Gm37136-201ENSMUST00000194368 194 ntBASIC35.18■■■■□ 3.22
Rrp7aQ9D1C9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Rrp7aQ9D1C9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC35.17■■■■□ 3.22
Rrp7aQ9D1C9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Rrp7aQ9D1C9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Rrp7aQ9D1C9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC35.15■■■■□ 3.22
Rrp7aQ9D1C9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Rrp7aQ9D1C9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC35.14■■■■□ 3.22
Rrp7aQ9D1C9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
Rrp7aQ9D1C9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC35.13■■■■□ 3.21
Rrp7aQ9D1C9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Rrp7aQ9D1C9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Rrp7aQ9D1C9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rrp7aQ9D1C9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rrp7aQ9D1C9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Rrp7aQ9D1C9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Rrp7aQ9D1C9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Rrp7aQ9D1C9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
Rrp7aQ9D1C9 Gm27502-201ENSMUST00000183495 199 ntBASIC35.09■■■■□ 3.21
Rrp7aQ9D1C9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC35.09■■■■□ 3.21
Rrp7aQ9D1C9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Rrp7aQ9D1C9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Rrp7aQ9D1C9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Rrp7aQ9D1C9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Rrp7aQ9D1C9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
Rrp7aQ9D1C9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Rrp7aQ9D1C9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Rrp7aQ9D1C9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rrp7aQ9D1C9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC35.03■■■■□ 3.2
Rrp7aQ9D1C9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rrp7aQ9D1C9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Rrp7aQ9D1C9 Gm13889-201ENSMUST00000099689 1386 ntBASIC35.02■■■■□ 3.2
Rrp7aQ9D1C9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC35.02■■■■□ 3.2
Rrp7aQ9D1C9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.19
Rrp7aQ9D1C9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Rrp7aQ9D1C9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC34.99■■■■□ 3.19
Rrp7aQ9D1C9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.99■■■■□ 3.19
Rrp7aQ9D1C9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rrp7aQ9D1C9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Rrp7aQ9D1C9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rrp7aQ9D1C9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rrp7aQ9D1C9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Rrp7aQ9D1C9 Gm12818-201ENSMUST00000117562 1349 ntBASIC34.97■■■■□ 3.19
Rrp7aQ9D1C9 Gm7332-201ENSMUST00000118351 454 ntBASIC34.96■■■■□ 3.19
Rrp7aQ9D1C9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Rrp7aQ9D1C9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.96■■■■□ 3.19
Rrp7aQ9D1C9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Rrp7aQ9D1C9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
Rrp7aQ9D1C9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.94■■■■□ 3.18
Rrp7aQ9D1C9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC34.93■■■■□ 3.18
Rrp7aQ9D1C9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rrp7aQ9D1C9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rrp7aQ9D1C9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Rrp7aQ9D1C9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
Rrp7aQ9D1C9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Rrp7aQ9D1C9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Rrp7aQ9D1C9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC34.9■■■■□ 3.18
Rrp7aQ9D1C9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC34.89■■■■□ 3.18
Rrp7aQ9D1C9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC34.89■■■■□ 3.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms