Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl35Q9CQL6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl35Q9CQL6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.35■□□□□ 0.37
Mrpl35Q9CQL6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Mrpl35Q9CQL6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl35Q9CQL6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.35■□□□□ 0.37
Mrpl35Q9CQL6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl35Q9CQL6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl35Q9CQL6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl35Q9CQL6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl35Q9CQL6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl35Q9CQL6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mrpl35Q9CQL6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mrpl35Q9CQL6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl35Q9CQL6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl35Q9CQL6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Mrpl35Q9CQL6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.31■□□□□ 0.36
Mrpl35Q9CQL6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mrpl35Q9CQL6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrpl35Q9CQL6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrpl35Q9CQL6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.3■□□□□ 0.36
Mrpl35Q9CQL6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Mrpl35Q9CQL6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl35Q9CQL6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Mrpl35Q9CQL6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl35Q9CQL6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl35Q9CQL6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl35Q9CQL6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.28■□□□□ 0.36
Mrpl35Q9CQL6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl35Q9CQL6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl35Q9CQL6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl35Q9CQL6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl35Q9CQL6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl35Q9CQL6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl35Q9CQL6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Mrpl35Q9CQL6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl35Q9CQL6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl35Q9CQL6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl35Q9CQL6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Mrpl35Q9CQL6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl35Q9CQL6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.23■□□□□ 0.35
Mrpl35Q9CQL6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl35Q9CQL6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl35Q9CQL6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl35Q9CQL6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.22■□□□□ 0.35
Mrpl35Q9CQL6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl35Q9CQL6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl35Q9CQL6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl35Q9CQL6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl35Q9CQL6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl35Q9CQL6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mrpl35Q9CQL6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mrpl35Q9CQL6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl35Q9CQL6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl35Q9CQL6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl35Q9CQL6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.19■□□□□ 0.34
Mrpl35Q9CQL6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl35Q9CQL6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl35Q9CQL6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl35Q9CQL6 Gm7432-201ENSMUST00000210343 879 ntBASIC17.17■□□□□ 0.34
Mrpl35Q9CQL6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl35Q9CQL6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.16■□□□□ 0.34
Mrpl35Q9CQL6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl35Q9CQL6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl35Q9CQL6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
Mrpl35Q9CQL6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mrpl35Q9CQL6 Particl-201ENSMUST00000205370 1560 ntBASIC17.15■□□□□ 0.34
Mrpl35Q9CQL6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Mrpl35Q9CQL6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Mrpl35Q9CQL6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.14■□□□□ 0.33
Mrpl35Q9CQL6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl35Q9CQL6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mrpl35Q9CQL6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl35Q9CQL6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl35Q9CQL6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mrpl35Q9CQL6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.13■□□□□ 0.33
Mrpl35Q9CQL6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Mrpl35Q9CQL6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mrpl35Q9CQL6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms