Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
Pcdhb22Q91XZ8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdhb22Q91XZ8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdhb22Q91XZ8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdhb22Q91XZ8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Pcdhb22Q91XZ8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhb22Q91XZ8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhb22Q91XZ8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pcdhb22Q91XZ8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Pcdhb22Q91XZ8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pcdhb22Q91XZ8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Pcdhb22Q91XZ8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Pcdhb22Q91XZ8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhb22Q91XZ8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pcdhb22Q91XZ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.74■■■□□ 2.03
Pcdhb22Q91XZ8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pcdhb22Q91XZ8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Pcdhb22Q91XZ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pcdhb22Q91XZ8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Pcdhb22Q91XZ8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.72■■■□□ 2.03
Pcdhb22Q91XZ8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Pcdhb22Q91XZ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhb22Q91XZ8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhb22Q91XZ8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhb22Q91XZ8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhb22Q91XZ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhb22Q91XZ8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhb22Q91XZ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.65■■■□□ 2.02
Pcdhb22Q91XZ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdhb22Q91XZ8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdhb22Q91XZ8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdhb22Q91XZ8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdhb22Q91XZ8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pcdhb22Q91XZ8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdhb22Q91XZ8 Particl-201ENSMUST00000205370 1560 ntBASIC27.63■■■□□ 2.01
Pcdhb22Q91XZ8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhb22Q91XZ8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Pcdhb22Q91XZ8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhb22Q91XZ8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Pcdhb22Q91XZ8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Pcdhb22Q91XZ8 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.6■■■□□ 2.01
Pcdhb22Q91XZ8 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.6■■■□□ 2.01
Pcdhb22Q91XZ8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Pcdhb22Q91XZ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdhb22Q91XZ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdhb22Q91XZ8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Pcdhb22Q91XZ8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Pcdhb22Q91XZ8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Pcdhb22Q91XZ8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.56■■■□□ 2
Pcdhb22Q91XZ8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.56■■■□□ 2
Pcdhb22Q91XZ8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.55■■■□□ 2
Pcdhb22Q91XZ8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.55■■■□□ 2
Pcdhb22Q91XZ8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Pcdhb22Q91XZ8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.55■■■□□ 2
Pcdhb22Q91XZ8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhb22Q91XZ8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhb22Q91XZ8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhb22Q91XZ8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.52■■■□□ 2
Pcdhb22Q91XZ8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Pcdhb22Q91XZ8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.51■■□□□ 1.99
Pcdhb22Q91XZ8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Pcdhb22Q91XZ8 Gm7432-201ENSMUST00000210343 879 ntBASIC27.5■■□□□ 1.99
Pcdhb22Q91XZ8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.5■■□□□ 1.99
Pcdhb22Q91XZ8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdhb22Q91XZ8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdhb22Q91XZ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhb22Q91XZ8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhb22Q91XZ8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhb22Q91XZ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhb22Q91XZ8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhb22Q91XZ8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhb22Q91XZ8 Gm37136-201ENSMUST00000194368 194 ntBASIC27.48■■□□□ 1.99
Pcdhb22Q91XZ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhb22Q91XZ8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhb22Q91XZ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.45■■□□□ 1.98
Pcdhb22Q91XZ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.45■■□□□ 1.98
Pcdhb22Q91XZ8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhb22Q91XZ8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhb22Q91XZ8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhb22Q91XZ8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.43■■□□□ 1.98
Pcdhb22Q91XZ8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb22Q91XZ8 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.42■■□□□ 1.98
Pcdhb22Q91XZ8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Pcdhb22Q91XZ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb22Q91XZ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Pcdhb22Q91XZ8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb22Q91XZ8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhb22Q91XZ8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Pcdhb22Q91XZ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.4■■□□□ 1.98
Pcdhb22Q91XZ8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhb22Q91XZ8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.38■■□□□ 1.97
Pcdhb22Q91XZ8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhb22Q91XZ8 Gm11599-201ENSMUST00000118720 878 ntBASIC27.37■■□□□ 1.97
Pcdhb22Q91XZ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms