Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TraipQ8VIG6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.46■■□□□ 1.67
TraipQ8VIG6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TraipQ8VIG6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TraipQ8VIG6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.44■■□□□ 1.66
TraipQ8VIG6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TraipQ8VIG6 Mir6538-201ENSMUST00000183713 110 ntBASIC25.43■■□□□ 1.66
TraipQ8VIG6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TraipQ8VIG6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.43■■□□□ 1.66
TraipQ8VIG6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TraipQ8VIG6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
TraipQ8VIG6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TraipQ8VIG6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TraipQ8VIG6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
TraipQ8VIG6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TraipQ8VIG6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.4■■□□□ 1.66
TraipQ8VIG6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TraipQ8VIG6 Gm6311-201ENSMUST00000073790 878 ntBASIC25.39■■□□□ 1.66
TraipQ8VIG6 Gm11175-201ENSMUST00000116172 543 ntBASIC25.38■■□□□ 1.65
TraipQ8VIG6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
TraipQ8VIG6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TraipQ8VIG6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TraipQ8VIG6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TraipQ8VIG6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.36■■□□□ 1.65
TraipQ8VIG6 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.36■■□□□ 1.65
TraipQ8VIG6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TraipQ8VIG6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TraipQ8VIG6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TraipQ8VIG6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TraipQ8VIG6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TraipQ8VIG6 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.34■■□□□ 1.65
TraipQ8VIG6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TraipQ8VIG6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TraipQ8VIG6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TraipQ8VIG6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TraipQ8VIG6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
TraipQ8VIG6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TraipQ8VIG6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.31■■□□□ 1.64
TraipQ8VIG6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TraipQ8VIG6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TraipQ8VIG6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.3■■□□□ 1.64
TraipQ8VIG6 Gm4799-201ENSMUST00000095396 657 ntBASIC25.3■■□□□ 1.64
TraipQ8VIG6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TraipQ8VIG6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TraipQ8VIG6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.29■■□□□ 1.64
TraipQ8VIG6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TraipQ8VIG6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
TraipQ8VIG6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TraipQ8VIG6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TraipQ8VIG6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TraipQ8VIG6 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.27■■□□□ 1.64
TraipQ8VIG6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.26■■□□□ 1.63
TraipQ8VIG6 Mir3960-201ENSMUST00000198213 73 ntBASIC25.26■■□□□ 1.63
TraipQ8VIG6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TraipQ8VIG6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TraipQ8VIG6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TraipQ8VIG6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TraipQ8VIG6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
TraipQ8VIG6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TraipQ8VIG6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TraipQ8VIG6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TraipQ8VIG6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TraipQ8VIG6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TraipQ8VIG6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TraipQ8VIG6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TraipQ8VIG6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TraipQ8VIG6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
TraipQ8VIG6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TraipQ8VIG6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TraipQ8VIG6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TraipQ8VIG6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TraipQ8VIG6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TraipQ8VIG6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.18■■□□□ 1.62
TraipQ8VIG6 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.18■■□□□ 1.62
TraipQ8VIG6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TraipQ8VIG6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TraipQ8VIG6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TraipQ8VIG6 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.17■■□□□ 1.62
TraipQ8VIG6 Gm45364-201ENSMUST00000210883 159 ntBASIC25.17■■□□□ 1.62
TraipQ8VIG6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.17■■□□□ 1.62
TraipQ8VIG6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TraipQ8VIG6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TraipQ8VIG6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TraipQ8VIG6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
TraipQ8VIG6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TraipQ8VIG6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TraipQ8VIG6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.14■■□□□ 1.62
TraipQ8VIG6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.14■■□□□ 1.61
TraipQ8VIG6 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.13■■□□□ 1.61
TraipQ8VIG6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TraipQ8VIG6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TraipQ8VIG6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TraipQ8VIG6 Gm9812-201ENSMUST00000061934 968 ntBASIC25.11■■□□□ 1.61
TraipQ8VIG6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.11■■□□□ 1.61
TraipQ8VIG6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TraipQ8VIG6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TraipQ8VIG6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TraipQ8VIG6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TraipQ8VIG6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
TraipQ8VIG6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms