Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.71■□□□□ 0.91
Odf4Q8VI88 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Odf4Q8VI88 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Odf4Q8VI88 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Odf4Q8VI88 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Odf4Q8VI88 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Odf4Q8VI88 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Odf4Q8VI88 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Odf4Q8VI88 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Odf4Q8VI88 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Odf4Q8VI88 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Odf4Q8VI88 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Odf4Q8VI88 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Odf4Q8VI88 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Odf4Q8VI88 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Odf4Q8VI88 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Odf4Q8VI88 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Odf4Q8VI88 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.68■□□□□ 0.9
Odf4Q8VI88 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Odf4Q8VI88 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Odf4Q8VI88 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Odf4Q8VI88 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Odf4Q8VI88 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Odf4Q8VI88 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Odf4Q8VI88 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Odf4Q8VI88 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Odf4Q8VI88 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.66■□□□□ 0.9
Odf4Q8VI88 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.66■□□□□ 0.9
Odf4Q8VI88 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Odf4Q8VI88 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.66■□□□□ 0.9
Odf4Q8VI88 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Odf4Q8VI88 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Odf4Q8VI88 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Odf4Q8VI88 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Odf4Q8VI88 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Odf4Q8VI88 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Odf4Q8VI88 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Odf4Q8VI88 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Odf4Q8VI88 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Odf4Q8VI88 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.62■□□□□ 0.89
Odf4Q8VI88 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Odf4Q8VI88 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Odf4Q8VI88 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Odf4Q8VI88 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Odf4Q8VI88 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.62■□□□□ 0.89
Odf4Q8VI88 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Odf4Q8VI88 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Odf4Q8VI88 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.61■□□□□ 0.89
Odf4Q8VI88 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Odf4Q8VI88 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Odf4Q8VI88 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Odf4Q8VI88 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.6■□□□□ 0.89
Odf4Q8VI88 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Odf4Q8VI88 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Odf4Q8VI88 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Odf4Q8VI88 Gm7432-201ENSMUST00000210343 879 ntBASIC20.59■□□□□ 0.89
Odf4Q8VI88 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Odf4Q8VI88 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Odf4Q8VI88 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Odf4Q8VI88 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
Odf4Q8VI88 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Odf4Q8VI88 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Odf4Q8VI88 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Odf4Q8VI88 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Odf4Q8VI88 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Odf4Q8VI88 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.55■□□□□ 0.88
Odf4Q8VI88 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Odf4Q8VI88 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Odf4Q8VI88 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Odf4Q8VI88 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Odf4Q8VI88 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Odf4Q8VI88 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Odf4Q8VI88 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Odf4Q8VI88 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Odf4Q8VI88 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Odf4Q8VI88 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Odf4Q8VI88 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Odf4Q8VI88 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Odf4Q8VI88 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Odf4Q8VI88 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Odf4Q8VI88 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Odf4Q8VI88 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Odf4Q8VI88 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.5■□□□□ 0.87
Odf4Q8VI88 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Odf4Q8VI88 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Odf4Q8VI88 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Odf4Q8VI88 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Odf4Q8VI88 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Odf4Q8VI88 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Odf4Q8VI88 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Odf4Q8VI88 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Odf4Q8VI88 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Odf4Q8VI88 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.49■□□□□ 0.87
Odf4Q8VI88 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms