Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lrrc42Q8R2U7 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.46■■□□□ 1.51
Lrrc42Q8R2U7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Lrrc42Q8R2U7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lrrc42Q8R2U7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Lrrc42Q8R2U7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Lrrc42Q8R2U7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lrrc42Q8R2U7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lrrc42Q8R2U7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lrrc42Q8R2U7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Lrrc42Q8R2U7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lrrc42Q8R2U7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lrrc42Q8R2U7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Lrrc42Q8R2U7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lrrc42Q8R2U7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lrrc42Q8R2U7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Lrrc42Q8R2U7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lrrc42Q8R2U7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lrrc42Q8R2U7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lrrc42Q8R2U7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Lrrc42Q8R2U7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lrrc42Q8R2U7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lrrc42Q8R2U7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lrrc42Q8R2U7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Lrrc42Q8R2U7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Lrrc42Q8R2U7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lrrc42Q8R2U7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Lrrc42Q8R2U7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lrrc42Q8R2U7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Lrrc42Q8R2U7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Lrrc42Q8R2U7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Lrrc42Q8R2U7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Lrrc42Q8R2U7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.37■■□□□ 1.49
Lrrc42Q8R2U7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lrrc42Q8R2U7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Lrrc42Q8R2U7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Nkain2-201ENSMUST00000092602 558 ntBASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Lrrc42Q8R2U7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Lrrc42Q8R2U7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lrrc42Q8R2U7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lrrc42Q8R2U7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Lrrc42Q8R2U7 Gm6821-201ENSMUST00000107540 542 ntBASIC24.33■■□□□ 1.49
Lrrc42Q8R2U7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Lrrc42Q8R2U7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Lrrc42Q8R2U7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
Lrrc42Q8R2U7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Lrrc42Q8R2U7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Lrrc42Q8R2U7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lrrc42Q8R2U7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Lrrc42Q8R2U7 Gm8503-201ENSMUST00000118131 455 ntBASIC24.3■■□□□ 1.48
Lrrc42Q8R2U7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lrrc42Q8R2U7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lrrc42Q8R2U7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lrrc42Q8R2U7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lrrc42Q8R2U7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Lrrc42Q8R2U7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.27■■□□□ 1.48
Lrrc42Q8R2U7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lrrc42Q8R2U7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lrrc42Q8R2U7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Lrrc42Q8R2U7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Lrrc42Q8R2U7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Lrrc42Q8R2U7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.26■■□□□ 1.47
Lrrc42Q8R2U7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Lrrc42Q8R2U7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Lrrc42Q8R2U7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.26■■□□□ 1.47
Lrrc42Q8R2U7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lrrc42Q8R2U7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Lrrc42Q8R2U7 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.25■■□□□ 1.47
Lrrc42Q8R2U7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Lrrc42Q8R2U7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.24■■□□□ 1.47
Lrrc42Q8R2U7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Lrrc42Q8R2U7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Lrrc42Q8R2U7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.23■■□□□ 1.47
Lrrc42Q8R2U7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lrrc42Q8R2U7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.21■■□□□ 1.47
Lrrc42Q8R2U7 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.21■■□□□ 1.47
Lrrc42Q8R2U7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.21■■□□□ 1.47
Lrrc42Q8R2U7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Lrrc42Q8R2U7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
Lrrc42Q8R2U7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Lrrc42Q8R2U7 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.2■■□□□ 1.46
Lrrc42Q8R2U7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Lrrc42Q8R2U7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Lrrc42Q8R2U7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Lrrc42Q8R2U7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.17■■□□□ 1.46
Lrrc42Q8R2U7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Lrrc42Q8R2U7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lrrc42Q8R2U7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
Lrrc42Q8R2U7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.15■■□□□ 1.46
Lrrc42Q8R2U7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Lrrc42Q8R2U7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Lrrc42Q8R2U7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms