Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Slc38a4Q8R1S9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
Slc38a4Q8R1S9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Slc38a4Q8R1S9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Slc38a4Q8R1S9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Slc38a4Q8R1S9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Slc38a4Q8R1S9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Slc38a4Q8R1S9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Slc38a4Q8R1S9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Slc38a4Q8R1S9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Slc38a4Q8R1S9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Slc38a4Q8R1S9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.19■■□□□ 1.14
Slc38a4Q8R1S9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Slc38a4Q8R1S9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Slc38a4Q8R1S9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Slc38a4Q8R1S9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Slc38a4Q8R1S9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Slc38a4Q8R1S9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Slc38a4Q8R1S9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc38a4Q8R1S9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc38a4Q8R1S9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc38a4Q8R1S9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Slc38a4Q8R1S9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc38a4Q8R1S9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc38a4Q8R1S9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.15■■□□□ 1.14
Slc38a4Q8R1S9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc38a4Q8R1S9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Slc38a4Q8R1S9 Gm30023-201ENSMUST00000197970 889 ntBASIC22.14■■□□□ 1.13
Slc38a4Q8R1S9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc38a4Q8R1S9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Slc38a4Q8R1S9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc38a4Q8R1S9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.13■■□□□ 1.13
Slc38a4Q8R1S9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Slc38a4Q8R1S9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc38a4Q8R1S9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc38a4Q8R1S9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc38a4Q8R1S9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.12■■□□□ 1.13
Slc38a4Q8R1S9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Slc38a4Q8R1S9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc38a4Q8R1S9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.11■■□□□ 1.13
Slc38a4Q8R1S9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc38a4Q8R1S9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc38a4Q8R1S9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc38a4Q8R1S9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc38a4Q8R1S9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Slc38a4Q8R1S9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Slc38a4Q8R1S9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.08■■□□□ 1.13
Slc38a4Q8R1S9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.08■■□□□ 1.12
Slc38a4Q8R1S9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc38a4Q8R1S9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc38a4Q8R1S9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Slc38a4Q8R1S9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc38a4Q8R1S9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc38a4Q8R1S9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Slc38a4Q8R1S9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc38a4Q8R1S9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc38a4Q8R1S9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc38a4Q8R1S9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc38a4Q8R1S9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Slc38a4Q8R1S9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc38a4Q8R1S9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.05■■□□□ 1.12
Slc38a4Q8R1S9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc38a4Q8R1S9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc38a4Q8R1S9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc38a4Q8R1S9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Slc38a4Q8R1S9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.03■■□□□ 1.12
Slc38a4Q8R1S9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Slc38a4Q8R1S9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Slc38a4Q8R1S9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Slc38a4Q8R1S9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc38a4Q8R1S9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc38a4Q8R1S9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc38a4Q8R1S9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Slc38a4Q8R1S9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Slc38a4Q8R1S9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc38a4Q8R1S9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.01■■□□□ 1.11
Slc38a4Q8R1S9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc38a4Q8R1S9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc38a4Q8R1S9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc38a4Q8R1S9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Slc38a4Q8R1S9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Slc38a4Q8R1S9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Slc38a4Q8R1S9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
Slc38a4Q8R1S9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Slc38a4Q8R1S9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Slc38a4Q8R1S9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Slc38a4Q8R1S9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Slc38a4Q8R1S9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Slc38a4Q8R1S9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Slc38a4Q8R1S9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc38a4Q8R1S9 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.98■■□□□ 1.11
Slc38a4Q8R1S9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.98■■□□□ 1.11
Slc38a4Q8R1S9 Nkain2-201ENSMUST00000092602 558 ntBASIC21.98■■□□□ 1.11
Slc38a4Q8R1S9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms