Protein–RNA interactions for Protein: Q8K5C8

Rdh9, Cis-retinol/androgen dehydrogenase type 3, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh9Q8K5C8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rdh9Q8K5C8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.51■□□□□ 0.87
Rdh9Q8K5C8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rdh9Q8K5C8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.51■□□□□ 0.87
Rdh9Q8K5C8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rdh9Q8K5C8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh9Q8K5C8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh9Q8K5C8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh9Q8K5C8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rdh9Q8K5C8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh9Q8K5C8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.49■□□□□ 0.87
Rdh9Q8K5C8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh9Q8K5C8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh9Q8K5C8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rdh9Q8K5C8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rdh9Q8K5C8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh9Q8K5C8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh9Q8K5C8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh9Q8K5C8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.45■□□□□ 0.86
Rdh9Q8K5C8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.44■□□□□ 0.86
Rdh9Q8K5C8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.44■□□□□ 0.86
Rdh9Q8K5C8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rdh9Q8K5C8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh9Q8K5C8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rdh9Q8K5C8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rdh9Q8K5C8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh9Q8K5C8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.41■□□□□ 0.86
Rdh9Q8K5C8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh9Q8K5C8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rdh9Q8K5C8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh9Q8K5C8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Rdh9Q8K5C8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rdh9Q8K5C8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Rdh9Q8K5C8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rdh9Q8K5C8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rdh9Q8K5C8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh9Q8K5C8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh9Q8K5C8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh9Q8K5C8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rdh9Q8K5C8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rdh9Q8K5C8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rdh9Q8K5C8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh9Q8K5C8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh9Q8K5C8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh9Q8K5C8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rdh9Q8K5C8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rdh9Q8K5C8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh9Q8K5C8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh9Q8K5C8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rdh9Q8K5C8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rdh9Q8K5C8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Rdh9Q8K5C8 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.33■□□□□ 0.85
Rdh9Q8K5C8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rdh9Q8K5C8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rdh9Q8K5C8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rdh9Q8K5C8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Rdh9Q8K5C8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Rdh9Q8K5C8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.32■□□□□ 0.84
Rdh9Q8K5C8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rdh9Q8K5C8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rdh9Q8K5C8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.29■□□□□ 0.84
Rdh9Q8K5C8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.29■□□□□ 0.84
Rdh9Q8K5C8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh9Q8K5C8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rdh9Q8K5C8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh9Q8K5C8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.28■□□□□ 0.84
Rdh9Q8K5C8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rdh9Q8K5C8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rdh9Q8K5C8 Gm6821-201ENSMUST00000107540 542 ntBASIC20.26■□□□□ 0.83
Rdh9Q8K5C8 Nkain2-201ENSMUST00000092602 558 ntBASIC20.26■□□□□ 0.83
Rdh9Q8K5C8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rdh9Q8K5C8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rdh9Q8K5C8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh9Q8K5C8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.24■□□□□ 0.83
Rdh9Q8K5C8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rdh9Q8K5C8 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.23■□□□□ 0.83
Rdh9Q8K5C8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rdh9Q8K5C8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rdh9Q8K5C8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms