Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm16437-201ENSMUST00000025669 507 ntBASIC24.51■■□□□ 1.51
Rtn4rl1Q8K0S5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm9806-201ENSMUST00000051080 552 ntBASIC24.51■■□□□ 1.51
Rtn4rl1Q8K0S5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rtn4rl1Q8K0S5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm11687-201ENSMUST00000118911 886 ntBASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm12366-201ENSMUST00000121722 873 ntBASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm5786-201ENSMUST00000085368 882 ntBASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rtn4rl1Q8K0S5 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.48■■□□□ 1.51
Rtn4rl1Q8K0S5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rtn4rl1Q8K0S5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn4rl1Q8K0S5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn4rl1Q8K0S5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rtn4rl1Q8K0S5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.45■■□□□ 1.5
Rtn4rl1Q8K0S5 Mir3960-201ENSMUST00000198213 73 ntBASIC24.45■■□□□ 1.5
Rtn4rl1Q8K0S5 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.45■■□□□ 1.5
Rtn4rl1Q8K0S5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.45■■□□□ 1.5
Rtn4rl1Q8K0S5 Gm45364-201ENSMUST00000210883 159 ntBASIC24.44■■□□□ 1.5
Rtn4rl1Q8K0S5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn4rl1Q8K0S5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rtn4rl1Q8K0S5 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.44■■□□□ 1.5
Rtn4rl1Q8K0S5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 Gm37136-201ENSMUST00000194368 194 ntBASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.43■■□□□ 1.5
Rtn4rl1Q8K0S5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.42■■□□□ 1.5
Rtn4rl1Q8K0S5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Rtn4rl1Q8K0S5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.41■■□□□ 1.5
Rtn4rl1Q8K0S5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.4■■□□□ 1.5
Rtn4rl1Q8K0S5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rtn4rl1Q8K0S5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtn4rl1Q8K0S5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rtn4rl1Q8K0S5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.38■■□□□ 1.49
Rtn4rl1Q8K0S5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn4rl1Q8K0S5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn4rl1Q8K0S5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rtn4rl1Q8K0S5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn4rl1Q8K0S5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rtn4rl1Q8K0S5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn4rl1Q8K0S5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtn4rl1Q8K0S5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtn4rl1Q8K0S5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rtn4rl1Q8K0S5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rtn4rl1Q8K0S5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.33■■□□□ 1.49
Rtn4rl1Q8K0S5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rtn4rl1Q8K0S5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.33■■□□□ 1.49
Rtn4rl1Q8K0S5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rtn4rl1Q8K0S5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rtn4rl1Q8K0S5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rtn4rl1Q8K0S5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rtn4rl1Q8K0S5 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.31■■□□□ 1.48
Rtn4rl1Q8K0S5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtn4rl1Q8K0S5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rtn4rl1Q8K0S5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtn4rl1Q8K0S5 Gm27502-201ENSMUST00000183495 199 ntBASIC24.29■■□□□ 1.48
Rtn4rl1Q8K0S5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtn4rl1Q8K0S5 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.29■■□□□ 1.48
Rtn4rl1Q8K0S5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.28■■□□□ 1.48
Rtn4rl1Q8K0S5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
Rtn4rl1Q8K0S5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
Rtn4rl1Q8K0S5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Rtn4rl1Q8K0S5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtn4rl1Q8K0S5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rtn4rl1Q8K0S5 Zxda-201ENSMUST00000117281 2621 ntBASIC24.26■■□□□ 1.47
Rtn4rl1Q8K0S5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtn4rl1Q8K0S5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtn4rl1Q8K0S5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtn4rl1Q8K0S5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Rtn4rl1Q8K0S5 Gm7332-201ENSMUST00000118351 454 ntBASIC24.24■■□□□ 1.47
Rtn4rl1Q8K0S5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rtn4rl1Q8K0S5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.23■■□□□ 1.47
Rtn4rl1Q8K0S5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rtn4rl1Q8K0S5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rtn4rl1Q8K0S5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtn4rl1Q8K0S5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.21■■□□□ 1.47
Rtn4rl1Q8K0S5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.21■■□□□ 1.47
Rtn4rl1Q8K0S5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms